Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BMP4P12644 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.39■□□□□ 0.69
BMP4P12644 AC024257.2-201ENST00000549699 147 ntBASIC19.39■□□□□ 0.69
BMP4P12644 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.39■□□□□ 0.69
BMP4P12644 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.39■□□□□ 0.69
BMP4P12644 AL138724.1-201ENST00000606771 1088 ntBASIC19.39■□□□□ 0.69
BMP4P12644 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BMP4P12644 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BMP4P12644 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BMP4P12644 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.39■□□□□ 0.69
BMP4P12644 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BMP4P12644 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
BMP4P12644 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BMP4P12644 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BMP4P12644 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BMP4P12644 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BMP4P12644 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BMP4P12644 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BMP4P12644 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.37■□□□□ 0.69
BMP4P12644 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
BMP4P12644 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
BMP4P12644 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
BMP4P12644 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
BMP4P12644 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
BMP4P12644 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BMP4P12644 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BMP4P12644 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BMP4P12644 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.37■□□□□ 0.69
BMP4P12644 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.37■□□□□ 0.69
BMP4P12644 AC009102.2-201ENST00000606772 1639 ntBASIC19.36■□□□□ 0.69
BMP4P12644 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BMP4P12644 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BMP4P12644 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BMP4P12644 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BMP4P12644 FEM1AP4-201ENST00000443167 1987 ntBASIC19.36■□□□□ 0.69
BMP4P12644 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.36■□□□□ 0.69
BMP4P12644 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BMP4P12644 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.36■□□□□ 0.69
BMP4P12644 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.35■□□□□ 0.69
BMP4P12644 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.35■□□□□ 0.69
BMP4P12644 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
BMP4P12644 AC099791.2-201ENST00000605725 427 ntBASIC19.35■□□□□ 0.69
BMP4P12644 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.35■□□□□ 0.69
BMP4P12644 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.35■□□□□ 0.69
BMP4P12644 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BMP4P12644 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BMP4P12644 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BMP4P12644 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BMP4P12644 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.35■□□□□ 0.69
BMP4P12644 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.34■□□□□ 0.69
BMP4P12644 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.34■□□□□ 0.69
BMP4P12644 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.34■□□□□ 0.69
BMP4P12644 AC011298.3-201ENST00000615796 283 ntBASIC19.34■□□□□ 0.69
BMP4P12644 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.34■□□□□ 0.69
BMP4P12644 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BMP4P12644 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
BMP4P12644 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
BMP4P12644 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.34■□□□□ 0.69
BMP4P12644 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BMP4P12644 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
BMP4P12644 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
BMP4P12644 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
BMP4P12644 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.33■□□□□ 0.69
BMP4P12644 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BMP4P12644 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.33■□□□□ 0.69
BMP4P12644 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BMP4P12644 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.33■□□□□ 0.68
BMP4P12644 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 Z98882.1-201ENST00000622160 2253 ntBASIC19.33■□□□□ 0.68
BMP4P12644 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.33■□□□□ 0.68
BMP4P12644 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
BMP4P12644 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 ALDH1A3-203ENST00000557963 1670 ntBASIC19.33■□□□□ 0.68
BMP4P12644 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
BMP4P12644 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BMP4P12644 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms