Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
IFNA1P01562 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 AC104564.3-201ENST00000582367 638 ntBASIC16.83■□□□□ 0.28
IFNA1P01562 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.83■□□□□ 0.28
IFNA1P01562 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.83■□□□□ 0.28
IFNA1P01562 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.83■□□□□ 0.28
IFNA1P01562 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
IFNA1P01562 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
IFNA1P01562 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNA1P01562 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
IFNA1P01562 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
IFNA1P01562 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
IFNA1P01562 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.82■□□□□ 0.28
IFNA1P01562 AC009086.3-201ENST00000623486 1008 ntBASIC16.82■□□□□ 0.28
IFNA1P01562 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNA1P01562 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNA1P01562 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNA1P01562 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNA1P01562 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IFNA1P01562 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
IFNA1P01562 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.81■□□□□ 0.28
IFNA1P01562 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.81■□□□□ 0.28
IFNA1P01562 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IFNA1P01562 AC018755.3-202ENST00000596210 929 ntBASIC16.81■□□□□ 0.28
IFNA1P01562 CA15P2-201ENST00000611168 834 ntBASIC16.81■□□□□ 0.28
IFNA1P01562 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNA1P01562 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
IFNA1P01562 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
IFNA1P01562 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
IFNA1P01562 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IFNA1P01562 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.8■□□□□ 0.28
IFNA1P01562 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 LINC01529-204ENST00000636474 1715 ntBASIC16.8■□□□□ 0.28
IFNA1P01562 MIR3648-2-201ENST00000581792 180 ntBASIC16.8■□□□□ 0.28
IFNA1P01562 MIR3648-1-201ENST00000615959 180 ntBASIC16.8■□□□□ 0.28
IFNA1P01562 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNA1P01562 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.8■□□□□ 0.28
IFNA1P01562 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNA1P01562 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNA1P01562 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNA1P01562 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNA1P01562 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNA1P01562 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNA1P01562 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IFNA1P01562 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
IFNA1P01562 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNA1P01562 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNA1P01562 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNA1P01562 AC087393.1-201ENST00000582896 145 ntBASIC16.79■□□□□ 0.28
IFNA1P01562 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNA1P01562 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNA1P01562 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
IFNA1P01562 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNA1P01562 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNA1P01562 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
IFNA1P01562 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNA1P01562 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFNA1P01562 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFNA1P01562 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNA1P01562 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
IFNA1P01562 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNA1P01562 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms