Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 GABARAPL3-202ENST00000624044 1851 ntBASIC19.23■□□□□ 0.67
CLPXO76031 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.23■□□□□ 0.67
CLPXO76031 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.23■□□□□ 0.67
CLPXO76031 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.23■□□□□ 0.67
CLPXO76031 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLPXO76031 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CLPXO76031 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.22■□□□□ 0.67
CLPXO76031 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLPXO76031 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.22■□□□□ 0.67
CLPXO76031 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.22■□□□□ 0.67
CLPXO76031 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLPXO76031 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLPXO76031 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPXO76031 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLPXO76031 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.22■□□□□ 0.67
CLPXO76031 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPXO76031 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPXO76031 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 AC131274.2-201ENST00000580697 1507 ntBASIC19.21■□□□□ 0.67
CLPXO76031 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.21■□□□□ 0.67
CLPXO76031 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CLPXO76031 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLPXO76031 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.21■□□□□ 0.67
CLPXO76031 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.21■□□□□ 0.67
CLPXO76031 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.21■□□□□ 0.67
CLPXO76031 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.21■□□□□ 0.67
CLPXO76031 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.21■□□□□ 0.67
CLPXO76031 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPXO76031 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLPXO76031 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLPXO76031 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
CLPXO76031 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLPXO76031 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPXO76031 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLPXO76031 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPXO76031 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPXO76031 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLPXO76031 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPXO76031 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLPXO76031 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CLPXO76031 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CLPXO76031 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPXO76031 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPXO76031 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLPXO76031 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPXO76031 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPXO76031 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms