Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ALDH1A3-203ENST00000557963 1670 ntBASIC19.09■□□□□ 0.65
PFDN1O60925 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PFDN1O60925 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PFDN1O60925 AC005332.8-201ENST00000622750 2735 ntBASIC19.09■□□□□ 0.65
PFDN1O60925 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PFDN1O60925 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PFDN1O60925 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PFDN1O60925 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PFDN1O60925 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PFDN1O60925 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.09■□□□□ 0.65
PFDN1O60925 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.08■□□□□ 0.65
PFDN1O60925 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.08■□□□□ 0.65
PFDN1O60925 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.08■□□□□ 0.65
PFDN1O60925 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.08■□□□□ 0.65
PFDN1O60925 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PFDN1O60925 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PFDN1O60925 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
PFDN1O60925 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PFDN1O60925 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.08■□□□□ 0.65
PFDN1O60925 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PFDN1O60925 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.08■□□□□ 0.64
PFDN1O60925 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PFDN1O60925 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.08■□□□□ 0.64
PFDN1O60925 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PFDN1O60925 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PFDN1O60925 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PFDN1O60925 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PFDN1O60925 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PFDN1O60925 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.08■□□□□ 0.64
PFDN1O60925 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PFDN1O60925 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 AP000974.1-201ENST00000623909 2387 ntBASIC19.07■□□□□ 0.64
PFDN1O60925 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PFDN1O60925 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PFDN1O60925 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PFDN1O60925 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PFDN1O60925 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.07■□□□□ 0.64
PFDN1O60925 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PFDN1O60925 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PFDN1O60925 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PFDN1O60925 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PFDN1O60925 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
PFDN1O60925 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PFDN1O60925 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PFDN1O60925 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PFDN1O60925 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PFDN1O60925 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PFDN1O60925 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PFDN1O60925 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PFDN1O60925 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.06■□□□□ 0.64
PFDN1O60925 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PFDN1O60925 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.05■□□□□ 0.64
PFDN1O60925 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
PFDN1O60925 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.05■□□□□ 0.64
PFDN1O60925 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PFDN1O60925 AC110285.7-201ENST00000624417 1536 ntBASIC19.05■□□□□ 0.64
PFDN1O60925 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.05■□□□□ 0.64
PFDN1O60925 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.04■□□□□ 0.64
PFDN1O60925 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PFDN1O60925 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PFDN1O60925 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.04■□□□□ 0.64
PFDN1O60925 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PFDN1O60925 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PFDN1O60925 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.04■□□□□ 0.64
PFDN1O60925 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PFDN1O60925 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PFDN1O60925 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PFDN1O60925 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PFDN1O60925 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PFDN1O60925 AL161729.1-201ENST00000604104 1402 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms