Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SPTBN2O15020 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
SPTBN2O15020 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.5■□□□□ 0.87
SPTBN2O15020 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPTBN2O15020 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.5■□□□□ 0.87
SPTBN2O15020 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPTBN2O15020 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.49■□□□□ 0.87
SPTBN2O15020 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.49■□□□□ 0.87
SPTBN2O15020 MIR4785-201ENST00000585005 73 ntBASIC20.49■□□□□ 0.87
SPTBN2O15020 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPTBN2O15020 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPTBN2O15020 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPTBN2O15020 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SPTBN2O15020 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.49■□□□□ 0.87
SPTBN2O15020 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.49■□□□□ 0.87
SPTBN2O15020 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.49■□□□□ 0.87
SPTBN2O15020 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.49■□□□□ 0.87
SPTBN2O15020 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.48■□□□□ 0.87
SPTBN2O15020 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTBN2O15020 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTBN2O15020 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTBN2O15020 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.48■□□□□ 0.87
SPTBN2O15020 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.48■□□□□ 0.87
SPTBN2O15020 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPTBN2O15020 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.48■□□□□ 0.87
SPTBN2O15020 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPTBN2O15020 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPTBN2O15020 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.48■□□□□ 0.87
SPTBN2O15020 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SPTBN2O15020 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.48■□□□□ 0.87
SPTBN2O15020 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.48■□□□□ 0.87
SPTBN2O15020 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPTBN2O15020 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.47■□□□□ 0.87
SPTBN2O15020 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.47■□□□□ 0.87
SPTBN2O15020 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.47■□□□□ 0.87
SPTBN2O15020 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SPTBN2O15020 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.47■□□□□ 0.87
SPTBN2O15020 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPTBN2O15020 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTBN2O15020 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPTBN2O15020 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPTBN2O15020 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.46■□□□□ 0.87
SPTBN2O15020 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.46■□□□□ 0.87
SPTBN2O15020 AC092865.7-201ENST00000641832 219 ntBASIC20.46■□□□□ 0.87
SPTBN2O15020 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTBN2O15020 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.46■□□□□ 0.87
SPTBN2O15020 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTBN2O15020 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.46■□□□□ 0.87
SPTBN2O15020 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.46■□□□□ 0.87
SPTBN2O15020 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTBN2O15020 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPTBN2O15020 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.46■□□□□ 0.87
SPTBN2O15020 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SPTBN2O15020 PNMA6B-201ENST00000538162 1200 ntBASIC20.46■□□□□ 0.87
SPTBN2O15020 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.46■□□□□ 0.87
SPTBN2O15020 RN7SL471P-201ENST00000580476 299 ntBASIC20.46■□□□□ 0.87
SPTBN2O15020 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SPTBN2O15020 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SPTBN2O15020 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SPTBN2O15020 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTBN2O15020 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTBN2O15020 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SPTBN2O15020 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPTBN2O15020 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.45■□□□□ 0.86
SPTBN2O15020 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.45■□□□□ 0.86
SPTBN2O15020 AL355472.2-201ENST00000422958 438 ntBASIC20.44■□□□□ 0.86
SPTBN2O15020 PRKY-204ENST00000533551 1019 ntBASIC20.44■□□□□ 0.86
SPTBN2O15020 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPTBN2O15020 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTBN2O15020 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTBN2O15020 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTBN2O15020 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTBN2O15020 KRT17P1-201ENST00000399211 1546 ntBASIC20.44■□□□□ 0.86
SPTBN2O15020 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPTBN2O15020 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.44■□□□□ 0.86
SPTBN2O15020 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.44■□□□□ 0.86
SPTBN2O15020 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.44■□□□□ 0.86
SPTBN2O15020 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.44■□□□□ 0.86
SPTBN2O15020 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SPTBN2O15020 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
SPTBN2O15020 LINC00543-201ENST00000567234 1845 ntBASIC20.44■□□□□ 0.86
SPTBN2O15020 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SPTBN2O15020 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SPTBN2O15020 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.43■□□□□ 0.86
SPTBN2O15020 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.43■□□□□ 0.86
SPTBN2O15020 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 RPS2P55-201ENST00000397318 883 ntBASIC20.43■□□□□ 0.86
SPTBN2O15020 KRT17P3-201ENST00000420566 1262 ntBASIC20.43■□□□□ 0.86
SPTBN2O15020 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.43■□□□□ 0.86
SPTBN2O15020 AC107956.1-201ENST00000494359 873 ntBASIC20.43■□□□□ 0.86
SPTBN2O15020 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.43■□□□□ 0.86
SPTBN2O15020 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPTBN2O15020 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms