Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-5A0A0J9YX44 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-5A0A0J9YX44 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 RARRES2P1-201ENST00000474487 481 ntBASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV5-5A0A0J9YX44 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 AC010525.1-201ENST00000585559 441 ntBASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV5-5A0A0J9YX44 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.46■□□□□ 0.54
TRBV5-5A0A0J9YX44 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRBV5-5A0A0J9YX44 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRBV5-5A0A0J9YX44 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRBV5-5A0A0J9YX44 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 AP004607.7-201ENST00000527152 1677 ntBASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV5-5A0A0J9YX44 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV5-5A0A0J9YX44 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms