Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 AC021231.2-201ENST00000594613 730 ntBASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 AC018445.3-201ENST00000624177 1945 ntBASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRAV22A0A0B4J277 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 BX323043.1-201ENST00000641006 1765 ntBASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV22A0A0B4J277 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 DUX4L29-201ENST00000425409 679 ntBASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 HLA-V-202ENST00000446817 847 ntBASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 AC044849.2-201ENST00000606596 710 ntBASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV22A0A0B4J277 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms