Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 C17orf82-201ENST00000623772 1530 ntBASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV13-1A0A0B4J241 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV13-1A0A0B4J241 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV13-1A0A0B4J241 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 TSPY9P-201ENST00000440215 945 ntBASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 TSPY11P-201ENST00000442607 1045 ntBASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 MIR4787-201ENST00000607364 84 ntBASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 AC010997.5-201ENST00000609182 354 ntBASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV13-1A0A0B4J241 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV13-1A0A0B4J241 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms