Protein–RNA interactions for Protein: A0A0B4J1R7

BORCS7-ASMT, BORCS7-ASMT readthrough (NMD candidate), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BORCS7-ASMTA0A0B4J1R7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 AC009831.1-201ENST00000580420 1582 ntBASIC17.28■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 AC004448.1-201ENST00000458332 883 ntBASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BORCS7-ASMTA0A0B4J1R7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 AL391422.3-201ENST00000603791 2761 ntBASIC17.27■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 FP325331.1-202ENST00000623531 1380 ntBASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 GABARAPL3-202ENST00000624044 1851 ntBASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.24■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.23■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BORCS7-ASMTA0A0B4J1R7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms