Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ARFGAP3-203ENST00000437119 1650 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 LINC02288-201ENST00000500215 2924 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 AC026801.3-201ENST00000606401 1565 ntTSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 TTK-208ENST00000509894 3725 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 LONRF2-202ENST00000409647 2363 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
NPIPA3F8WFD2 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 DEPDC5-222ENST00000535622 5155 ntTSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ZNF597-201ENST00000301744 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 DNMT3B-201ENST00000201963 4255 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC027801.2-201ENST00000515692 1816 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ILK-215ENST00000537806 1801 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 OGFOD1-207ENST00000566157 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 FMO1-208ENST00000617670 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC131212.2-201ENST00000622917 1355 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 FBXO25-201ENST00000276326 2104 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC026797.1-201ENST00000624837 2869 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ZSCAN5A-205ENST00000587340 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TM2D3-202ENST00000347970 1329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 SERHL2-202ENST00000335879 753 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TPTE2P5-201ENST00000379515 450 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 DNM1P48-201ENST00000419538 439 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 GHRL-203ENST00000422159 401 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC108025.2-201ENST00000455579 1199 ntTSL 3 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 DUBR-204ENST00000490441 1149 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 GUSBP8-201ENST00000502652 679 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 MRPL27-206ENST00000511860 869 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC233724.12-201ENST00000512227 594 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TMA16-208ENST00000513134 747 ntTSL 3 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC008429.1-201ENST00000520067 966 ntTSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 CLCF1-202ENST00000533438 967 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC099524.1-205ENST00000562180 674 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AL133299.1-201ENST00000565968 507 ntTSL 3 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AP005121.2-201ENST00000583306 1101 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ZNF226-214ENST00000589160 656 ntTSL 4 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 LINC01882-201ENST00000589930 569 ntTSL 3 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC010636.1-201ENST00000598116 628 ntTSL 3 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC068491.3-201ENST00000603052 606 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 LINC01517-202ENST00000611112 539 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 OR10G1P-201ENST00000612164 944 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TARDBP-217ENST00000616545 920 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC022558.3-201ENST00000616598 688 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 NCF4-AS1-202ENST00000619915 995 ntTSL 4 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 FAM74A3-201ENST00000620271 472 ntBASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TARDBP-226ENST00000621790 1008 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 AC244517.2-204ENST00000624802 415 ntTSL 3 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TARDBP-229ENST00000638264 774 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ZNF558-207ENST00000601372 7032 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 FTLP10-201ENST00000503647 1501 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 POTED-201ENST00000299443 1826 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 PIH1D2-207ENST00000530641 1838 ntTSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 MAN1C1-202ENST00000374329 2461 ntTSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 HORMAD1-204ENST00000368995 1794 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 SPECC1-204ENST00000395527 3363 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
NPIPA3F8WFD2 HIF3A-205ENST00000377670 5852 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 FRY-202ENST00000380250 10688 ntTSL 5 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 FRY-209ENST00000642040 10697 ntBASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 LONP2-201ENST00000285737 8199 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 GPS2-202ENST00000389167 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 POTEB2-202ENST00000454856 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 TPP2-201ENST00000376052 5447 ntTSL 5 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 AC093525.7-201ENST00000569852 3626 ntBASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 REEP1-201ENST00000165698 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 ITGA10-201ENST00000369304 5269 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 NMS-201ENST00000376865 485 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 MOG-217ENST00000376891 889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 IGHV4-28-201ENST00000390612 425 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 MOG-222ENST00000396701 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
NPIPA3F8WFD2 MOG-223ENST00000396704 675 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms