RNA–Protein interactions for RNA: ENST00000165698.9

REEP1-201, Transcript of receptor accessory protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REEP1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP1-201ENST00000165698 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
REEP1-201ENST00000165698 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
REEP1-201ENST00000165698 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
REEP1-201ENST00000165698 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
REEP1-201ENST00000165698 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
REEP1-201ENST00000165698 ABCC9O60706 1549 aa19.47■□□□□ 0.71
REEP1-201ENST00000165698 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
REEP1-201ENST00000165698 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
REEP1-201ENST00000165698 TTBK1Q5TCY1 1321 aaPredicted RBP19.07■□□□□ 0.64
REEP1-201ENST00000165698 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
REEP1-201ENST00000165698 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
REEP1-201ENST00000165698 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
REEP1-201ENST00000165698 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
REEP1-201ENST00000165698 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
REEP1-201ENST00000165698 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
REEP1-201ENST00000165698 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
REEP1-201ENST00000165698 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
REEP1-201ENST00000165698 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
REEP1-201ENST00000165698 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
REEP1-201ENST00000165698 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
REEP1-201ENST00000165698 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
REEP1-201ENST00000165698 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
REEP1-201ENST00000165698 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
REEP1-201ENST00000165698 APLP2Q06481 763 aa17.88■□□□□ 0.45
REEP1-201ENST00000165698 ITGAEP38570 1179 aa17.88■□□□□ 0.45
REEP1-201ENST00000165698 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.43
REEP1-201ENST00000165698 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
REEP1-201ENST00000165698 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
REEP1-201ENST00000165698 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
REEP1-201ENST00000165698 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
REEP1-201ENST00000165698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
REEP1-201ENST00000165698 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
REEP1-201ENST00000165698 NACADO15069 1562 aa17.67■□□□□ 0.42
REEP1-201ENST00000165698 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
REEP1-201ENST00000165698 FBLN2P98095 1184 aa17.59■□□□□ 0.41
REEP1-201ENST00000165698 WIZO95785 1651 aa17.58■□□□□ 0.4
REEP1-201ENST00000165698 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
REEP1-201ENST00000165698 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
REEP1-201ENST00000165698 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
REEP1-201ENST00000165698 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
REEP1-201ENST00000165698 HRCP23327 699 aa17.45■□□□□ 0.38
REEP1-201ENST00000165698 SOGA1O94964 1423 aa17.39■□□□□ 0.37
REEP1-201ENST00000165698 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
REEP1-201ENST00000165698 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
REEP1-201ENST00000165698 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
REEP1-201ENST00000165698 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
REEP1-201ENST00000165698 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
REEP1-201ENST00000165698 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
REEP1-201ENST00000165698 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
REEP1-201ENST00000165698 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
REEP1-201ENST00000165698 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
REEP1-201ENST00000165698 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
REEP1-201ENST00000165698 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
REEP1-201ENST00000165698 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
REEP1-201ENST00000165698 CEP162Q5TB80 1403 aa17.02■□□□□ 0.32
REEP1-201ENST00000165698 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
REEP1-201ENST00000165698 ZNF777Q9ULD5 760 aaPredicted RBP16.99■□□□□ 0.31
REEP1-201ENST00000165698 CHIC2Q9UKJ5 165 aa16.98■□□□□ 0.31
REEP1-201ENST00000165698 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
REEP1-201ENST00000165698 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
REEP1-201ENST00000165698 CLIP1P30622 1438 aa16.95■□□□□ 0.3
REEP1-201ENST00000165698 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
REEP1-201ENST00000165698 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
REEP1-201ENST00000165698 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
REEP1-201ENST00000165698 NESP48681 1621 aa16.91■□□□□ 0.3
REEP1-201ENST00000165698 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
REEP1-201ENST00000165698 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
REEP1-201ENST00000165698 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
REEP1-201ENST00000165698 CUX2O14529 1486 aa16.89■□□□□ 0.29
REEP1-201ENST00000165698 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
REEP1-201ENST00000165698 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
REEP1-201ENST00000165698 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
REEP1-201ENST00000165698 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.29
REEP1-201ENST00000165698 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.29
REEP1-201ENST00000165698 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
REEP1-201ENST00000165698 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
REEP1-201ENST00000165698 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
REEP1-201ENST00000165698 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
REEP1-201ENST00000165698 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
REEP1-201ENST00000165698 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
REEP1-201ENST00000165698 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
REEP1-201ENST00000165698 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
REEP1-201ENST00000165698 RRP7BPQ9NSQ0 103 aa16.74■□□□□ 0.27
REEP1-201ENST00000165698 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
REEP1-201ENST00000165698 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
REEP1-201ENST00000165698 SENP3-EIF4A1A0A087X0R7 540 aa16.67■□□□□ 0.26
REEP1-201ENST00000165698 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
REEP1-201ENST00000165698 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
REEP1-201ENST00000165698 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
REEP1-201ENST00000165698 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
REEP1-201ENST00000165698 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
REEP1-201ENST00000165698 SIN3AQ96ST3 1273 aa16.63■□□□□ 0.25
REEP1-201ENST00000165698 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
REEP1-201ENST00000165698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.25
REEP1-201ENST00000165698 FHOD3Q2V2M9 1422 aa16.57■□□□□ 0.24
REEP1-201ENST00000165698 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
REEP1-201ENST00000165698 FOXD1Q16676 465 aa16.56■□□□□ 0.24
REEP1-201ENST00000165698 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.24
REEP1-201ENST00000165698 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
REEP1-201ENST00000165698 EEA1Q15075 1411 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms