RNA–Protein interactions for RNA: ENST00000525539.5

PKD1L2-203, Transcript of polycystin 1 like 2 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD1L2, Length 7,379 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L2-203ENST00000525539 DCAF8L2P0C7V8 631 aa18.36■□□□□ 0.53
PKD1L2-203ENST00000525539 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
PKD1L2-203ENST00000525539 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
PKD1L2-203ENST00000525539 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
PKD1L2-203ENST00000525539 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
PKD1L2-203ENST00000525539 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
PKD1L2-203ENST00000525539 APLP2Q06481 763 aa16.88■□□□□ 0.29
PKD1L2-203ENST00000525539 TTBK1Q5TCY1 1321 aaPredicted RBP16.83■□□□□ 0.28
PKD1L2-203ENST00000525539 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
PKD1L2-203ENST00000525539 CCER1Q8TC90 406 aaPredicted RBP16.68■□□□□ 0.26
PKD1L2-203ENST00000525539 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
PKD1L2-203ENST00000525539 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
PKD1L2-203ENST00000525539 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
PKD1L2-203ENST00000525539 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
PKD1L2-203ENST00000525539 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
PKD1L2-203ENST00000525539 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
PKD1L2-203ENST00000525539 NEFLP07196 543 aa16.37■□□□□ 0.21
PKD1L2-203ENST00000525539 ATP1B4Q9UN42 357 aaPredicted RBP16.34■□□□□ 0.21
PKD1L2-203ENST00000525539 MYT1Q01538 1121 aa16.34■□□□□ 0.21
PKD1L2-203ENST00000525539 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
PKD1L2-203ENST00000525539 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
PKD1L2-203ENST00000525539 DAXXQ9UER7 740 aaPredicted RBP16.06■□□□□ 0.16
PKD1L2-203ENST00000525539 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
PKD1L2-203ENST00000525539 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
PKD1L2-203ENST00000525539 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
PKD1L2-203ENST00000525539 ITGAEP38570 1179 aa15.77■□□□□ 0.12
PKD1L2-203ENST00000525539 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
PKD1L2-203ENST00000525539 HRCP23327 699 aa15.74■□□□□ 0.11
PKD1L2-203ENST00000525539 MYT1LQ9UL68 1186 aa15.71■□□□□ 0.11
PKD1L2-203ENST00000525539 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
PKD1L2-203ENST00000525539 RTL5Q5HYW3 569 aaPredicted RBP15.68■□□□□ 0.1
PKD1L2-203ENST00000525539 CLSPNQ9HAW4 1339 aa15.61■□□□□ 0.09
PKD1L2-203ENST00000525539 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
PKD1L2-203ENST00000525539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
PKD1L2-203ENST00000525539 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
PKD1L2-203ENST00000525539 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
PKD1L2-203ENST00000525539 LOC105371045A0A1W2PR82 267 aa15.46■□□□□ 0.07
PKD1L2-203ENST00000525539 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
PKD1L2-203ENST00000525539 BCANQ96GW7 911 aa15.43■□□□□ 0.06
PKD1L2-203ENST00000525539 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
PKD1L2-203ENST00000525539 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.03
PKD1L2-203ENST00000525539 FAM50AQ14320 339 aaKnown RBP15.26■□□□□ 0.03
PKD1L2-203ENST00000525539 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
PKD1L2-203ENST00000525539 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
PKD1L2-203ENST00000525539 TRIM52Q96A61 297 aa15.21■□□□□ 0.03
PKD1L2-203ENST00000525539 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
PKD1L2-203ENST00000525539 ANP32CO43423 234 aa15.15■□□□□ 0.02
PKD1L2-203ENST00000525539 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
PKD1L2-203ENST00000525539 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
PKD1L2-203ENST00000525539 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
PKD1L2-203ENST00000525539 NPM2Q86SE8 214 aaKnown RBP15.06■□□□□ 0
PKD1L2-203ENST00000525539 EIF5BO60841 1220 aaKnown RBP15.06■□□□□ 0
PKD1L2-203ENST00000525539 ANP32AP39687 249 aaKnown RBP15.04■□□□□ -0
PKD1L2-203ENST00000525539 ANP32BQ92688 251 aaKnown RBP14.91□□□□□ -0.02
PKD1L2-203ENST00000525539 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
PKD1L2-203ENST00000525539 NEFMP07197 916 aa14.9□□□□□ -0.02
PKD1L2-203ENST00000525539 HSP90AA1P07900 732 aaKnown RBP14.86□□□□□ -0.03
PKD1L2-203ENST00000525539 FKBP8Q14318 412 aa14.83□□□□□ -0.04
PKD1L2-203ENST00000525539 NBR1Q14596 966 aa14.8□□□□□ -0.04
PKD1L2-203ENST00000525539 GLIPR1L2Q4G1C9 344 aa14.8□□□□□ -0.04
PKD1L2-203ENST00000525539 ARXQ96QS3 562 aa14.79□□□□□ -0.04
PKD1L2-203ENST00000525539 ARID3CA6NKF2 412 aa14.74□□□□□ -0.05
PKD1L2-203ENST00000525539 UPF2Q9HAU5 1272 aaKnown RBP14.74□□□□□ -0.05
PKD1L2-203ENST00000525539 FBLN2P98095 1184 aa14.73□□□□□ -0.05
PKD1L2-203ENST00000525539 SALL2Q9Y467 1007 aaPredicted RBP14.69□□□□□ -0.06
PKD1L2-203ENST00000525539 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
PKD1L2-203ENST00000525539 HNRNPUQ00839 825 aaKnown RBP eCLIP14.68□□□□□ -0.06
PKD1L2-203ENST00000525539 FAM9BQ8IZU0 186 aa14.67□□□□□ -0.06
PKD1L2-203ENST00000525539 ZNF777Q9ULD5 760 aaPredicted RBP14.65□□□□□ -0.06
PKD1L2-203ENST00000525539 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
PKD1L2-203ENST00000525539 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
PKD1L2-203ENST00000525539 CCDC136Q96JN2 1154 aa14.6□□□□□ -0.07
PKD1L2-203ENST00000525539 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
PKD1L2-203ENST00000525539 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
PKD1L2-203ENST00000525539 CHGAP10645 457 aaKnown RBP14.56□□□□□ -0.08
PKD1L2-203ENST00000525539 IRX6P78412 446 aaPredicted RBP14.54□□□□□ -0.08
PKD1L2-203ENST00000525539 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.08
PKD1L2-203ENST00000525539 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
PKD1L2-203ENST00000525539 TMC1Q8TDI8 760 aa14.5□□□□□ -0.09
PKD1L2-203ENST00000525539 CDK11BP21127 795 aaKnown RBP14.46□□□□□ -0.09
PKD1L2-203ENST00000525539 WDR43Q15061 677 aaKnown RBP eCLIP14.46□□□□□ -0.09
PKD1L2-203ENST00000525539 ESF1Q9H501 851 aaKnown RBP14.46□□□□□ -0.09
PKD1L2-203ENST00000525539 TRIM44Q96DX7 344 aaPredicted RBP14.43□□□□□ -0.1
PKD1L2-203ENST00000525539 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
PKD1L2-203ENST00000525539 MYH16Q9H6N6 1097 aa14.4□□□□□ -0.1
PKD1L2-203ENST00000525539 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
PKD1L2-203ENST00000525539 ABCC9O60706 1549 aa14.39□□□□□ -0.11
PKD1L2-203ENST00000525539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.11
PKD1L2-203ENST00000525539 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
PKD1L2-203ENST00000525539 NCLP19338 710 aaKnown RBP14.36□□□□□ -0.11
PKD1L2-203ENST00000525539 TPRNQ4KMQ1 711 aa14.36□□□□□ -0.11
PKD1L2-203ENST00000525539 DDRGK1Q96HY6 314 aa14.36□□□□□ -0.11
PKD1L2-203ENST00000525539 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
PKD1L2-203ENST00000525539 BECN1Q14457 450 aa14.36□□□□□ -0.11
PKD1L2-203ENST00000525539 HIRIP3Q9BW71 556 aaPredicted RBP14.35□□□□□ -0.11
PKD1L2-203ENST00000525539 CHIC2Q9UKJ5 165 aa14.35□□□□□ -0.11
PKD1L2-203ENST00000525539 A0A0G2JS52 829 aa14.34□□□□□ -0.11
PKD1L2-203ENST00000525539 TNNT2P45379 298 aaPredicted RBP14.33□□□□□ -0.11
PKD1L2-203ENST00000525539 MIER1Q8N108 512 aa14.33□□□□□ -0.12
PKD1L2-203ENST00000525539 PTMAP06454 111 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms