Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AF254982.1-201ENST00000611755 311 ntBASIC10.46□□□□□ -0.73
NPIPA3F8WFD2 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC10.46□□□□□ -0.73
NPIPA3F8WFD2 PAX8-AS1-217ENST00000617509 627 ntTSL 4 BASIC10.46□□□□□ -0.73
NPIPA3F8WFD2 FAM238C-201ENST00000638416 868 ntTSL 2 BASIC10.46□□□□□ -0.73
NPIPA3F8WFD2 ATP2B2-204ENST00000397077 8964 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
NPIPA3F8WFD2 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
NPIPA3F8WFD2 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 CYP1B1-204ENST00000494864 1479 ntTSL 5 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 USP17L4-201ENST00000526929 1593 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 USP17L1-201ENST00000529559 1593 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 USP17L3-201ENST00000530484 1593 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 PDE4C-210ENST00000597297 1559 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 COQ6-202ENST00000394026 1608 ntTSL 2 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 AC023824.5-201ENST00000564059 1766 ntBASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 PFN1P2-201ENST00000604437 1834 ntBASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 RAP1GAP2-204ENST00000542807 3110 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 LYPD6-201ENST00000334166 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 EPB41L4A-211ENST00000621003 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
NPIPA3F8WFD2 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 MATN2-201ENST00000254898 4106 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 FLT4-206ENST00000502649 4140 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 EFCAB13-201ENST00000331493 3931 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 RAPGEF3-219ENST00000549151 3265 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 CHRNA7-224ENST00000637183 2912 ntTSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 AL354796.1-201ENST00000623292 1951 ntBASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 AL138787.1-201ENST00000446354 1674 ntTSL 3 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 ZNF461-213ENST00000614133 1692 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 C20orf96-201ENST00000360321 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 SMAD3-202ENST00000439724 1530 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 PRAMEF36P-202ENST00000448180 1452 ntBASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 ARHGAP30-202ENST00000368015 3887 ntTSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 FBXO16-201ENST00000346498 1205 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 GSTM5-202ENST00000369812 657 ntTSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 LINC01219-201ENST00000418612 722 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 LINC01079-201ENST00000431171 580 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 OR7E23P-201ENST00000435600 1048 ntBASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 SPON1-AS1-201ENST00000534587 240 ntTSL 3 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 AC098965.1-201ENST00000564217 967 ntBASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 RPAIN-214ENST00000574003 561 ntTSL 4 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 Metazoa_SRP.56-201ENST00000612077 279 ntBASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 MYO10-203ENST00000505695 4803 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 TCF7-203ENST00000395023 2815 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 SERINC3-202ENST00000342374 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 AL606970.1-201ENST00000445442 2559 ntTSL 3 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 PPP2R5C-203ENST00000350249 3845 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 MDH2-201ENST00000315758 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 FRMPD2-202ENST00000374201 4997 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 C17orf47-201ENST00000321691 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 LIMK1-202ENST00000418310 3360 ntTSL 5 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 AC007388.1-208ENST00000438649 1901 ntTSL 2 BASIC10.45□□□□□ -0.74
NPIPA3F8WFD2 POLR3C-201ENST00000334163 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 PCID2-206ENST00000375479 1671 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 SLC12A6-202ENST00000354181 4568 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 ACTN4P1-201ENST00000514175 1451 ntBASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 AFG3L1P-214ENST00000454997 3327 ntTSL 2 BASIC10.44□□□□□ -0.74
NPIPA3F8WFD2 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms