RNA–Protein interactions for RNA: ENST00000334166.8

LYPD6-201, Transcript of LY6/PLAUR domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYPD6, Length 4,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD6-201ENST00000334166 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
LYPD6-201ENST00000334166 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
LYPD6-201ENST00000334166 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
LYPD6-201ENST00000334166 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
LYPD6-201ENST00000334166 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
LYPD6-201ENST00000334166 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
LYPD6-201ENST00000334166 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
LYPD6-201ENST00000334166 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
LYPD6-201ENST00000334166 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
LYPD6-201ENST00000334166 LOC105371045A0A1W2PR82 267 aa19.58■□□□□ 0.72
LYPD6-201ENST00000334166 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
LYPD6-201ENST00000334166 HRCP23327 699 aa19.38■□□□□ 0.69
LYPD6-201ENST00000334166 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
LYPD6-201ENST00000334166 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
LYPD6-201ENST00000334166 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
LYPD6-201ENST00000334166 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
LYPD6-201ENST00000334166 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
LYPD6-201ENST00000334166 ABCC9O60706 1549 aa19.05■□□□□ 0.64
LYPD6-201ENST00000334166 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
LYPD6-201ENST00000334166 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
LYPD6-201ENST00000334166 TTBK1Q5TCY1 1321 aaPredicted RBP18.8■□□□□ 0.6
LYPD6-201ENST00000334166 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
LYPD6-201ENST00000334166 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
LYPD6-201ENST00000334166 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
LYPD6-201ENST00000334166 WIZO95785 1651 aa18.5■□□□□ 0.55
LYPD6-201ENST00000334166 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
LYPD6-201ENST00000334166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
LYPD6-201ENST00000334166 NACADO15069 1562 aa18.46■□□□□ 0.55
LYPD6-201ENST00000334166 ZEB1P37275 1124 aaPredicted RBP18.44■□□□□ 0.54
LYPD6-201ENST00000334166 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
LYPD6-201ENST00000334166 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
LYPD6-201ENST00000334166 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
LYPD6-201ENST00000334166 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
LYPD6-201ENST00000334166 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
LYPD6-201ENST00000334166 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
LYPD6-201ENST00000334166 SOGA1O94964 1423 aa18.17■□□□□ 0.5
LYPD6-201ENST00000334166 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
LYPD6-201ENST00000334166 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.49
LYPD6-201ENST00000334166 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
LYPD6-201ENST00000334166 CEP162Q5TB80 1403 aa18.06■□□□□ 0.48
LYPD6-201ENST00000334166 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
LYPD6-201ENST00000334166 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
LYPD6-201ENST00000334166 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
LYPD6-201ENST00000334166 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
LYPD6-201ENST00000334166 DIEXFQ68CQ4 756 aaKnown RBP17.97■□□□□ 0.47
LYPD6-201ENST00000334166 APLP2Q06481 763 aa17.93■□□□□ 0.46
LYPD6-201ENST00000334166 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
LYPD6-201ENST00000334166 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
LYPD6-201ENST00000334166 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
LYPD6-201ENST00000334166 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.45
LYPD6-201ENST00000334166 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
LYPD6-201ENST00000334166 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
LYPD6-201ENST00000334166 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
LYPD6-201ENST00000334166 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.44
LYPD6-201ENST00000334166 GTF3C3Q9Y5Q9 886 aa17.75■□□□□ 0.43
LYPD6-201ENST00000334166 CLIP1P30622 1438 aa17.74■□□□□ 0.43
LYPD6-201ENST00000334166 EEA1Q15075 1411 aa17.73■□□□□ 0.43
LYPD6-201ENST00000334166 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
LYPD6-201ENST00000334166 ITGAEP38570 1179 aa17.72■□□□□ 0.43
LYPD6-201ENST00000334166 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
LYPD6-201ENST00000334166 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
LYPD6-201ENST00000334166 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
LYPD6-201ENST00000334166 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
LYPD6-201ENST00000334166 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
LYPD6-201ENST00000334166 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
LYPD6-201ENST00000334166 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
LYPD6-201ENST00000334166 MIER1Q8N108 512 aa17.6■□□□□ 0.41
LYPD6-201ENST00000334166 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
LYPD6-201ENST00000334166 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
LYPD6-201ENST00000334166 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
LYPD6-201ENST00000334166 P3H3Q8IVL6 736 aa17.47■□□□□ 0.39
LYPD6-201ENST00000334166 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
LYPD6-201ENST00000334166 KIF21BO75037 1637 aa17.41■□□□□ 0.38
LYPD6-201ENST00000334166 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
LYPD6-201ENST00000334166 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
LYPD6-201ENST00000334166 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
LYPD6-201ENST00000334166 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
LYPD6-201ENST00000334166 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
LYPD6-201ENST00000334166 CUX1P39880 1505 aa17.27■□□□□ 0.35
LYPD6-201ENST00000334166 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
LYPD6-201ENST00000334166 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
LYPD6-201ENST00000334166 CUX2O14529 1486 aa17.24■□□□□ 0.35
LYPD6-201ENST00000334166 HIRIP3Q9BW71 556 aaPredicted RBP17.21■□□□□ 0.35
LYPD6-201ENST00000334166 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
LYPD6-201ENST00000334166 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
LYPD6-201ENST00000334166 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
LYPD6-201ENST00000334166 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
LYPD6-201ENST00000334166 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
LYPD6-201ENST00000334166 KCNH8Q96L42 1107 aa17.13■□□□□ 0.33
LYPD6-201ENST00000334166 IGF1RP08069 1367 aa17.13■□□□□ 0.33
LYPD6-201ENST00000334166 CFTRP13569 1480 aa17.11■□□□□ 0.33
LYPD6-201ENST00000334166 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
LYPD6-201ENST00000334166 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
LYPD6-201ENST00000334166 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
LYPD6-201ENST00000334166 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
LYPD6-201ENST00000334166 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
LYPD6-201ENST00000334166 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
LYPD6-201ENST00000334166 BCANQ96GW7 911 aa17.06■□□□□ 0.32
LYPD6-201ENST00000334166 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
LYPD6-201ENST00000334166 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms