Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
COX11Q9Y6N1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.52■□□□□ 0.08
COX11Q9Y6N1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COX11Q9Y6N1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.52■□□□□ 0.08
COX11Q9Y6N1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.52■□□□□ 0.08
COX11Q9Y6N1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COX11Q9Y6N1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
COX11Q9Y6N1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COX11Q9Y6N1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
COX11Q9Y6N1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COX11Q9Y6N1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.51■□□□□ 0.07
COX11Q9Y6N1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 AC009299.2-201ENST00000482477 511 ntBASIC15.5■□□□□ 0.07
COX11Q9Y6N1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 AC018445.3-201ENST00000624177 1945 ntBASIC15.5■□□□□ 0.07
COX11Q9Y6N1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
COX11Q9Y6N1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 AL451085.2-201ENST00000605085 799 ntBASIC15.49■□□□□ 0.07
COX11Q9Y6N1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COX11Q9Y6N1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 AC080038.3-201ENST00000623346 1952 ntBASIC15.48■□□□□ 0.07
COX11Q9Y6N1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 AL035685.1-201ENST00000636663 812 ntBASIC15.48■□□□□ 0.07
COX11Q9Y6N1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COX11Q9Y6N1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COX11Q9Y6N1 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms