Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 LINC01529-204ENST00000636474 1715 ntBASIC18.6■□□□□ 0.57
DUX4Q9UBX2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUX4Q9UBX2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DUX4Q9UBX2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.58■□□□□ 0.57
DUX4Q9UBX2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.58■□□□□ 0.57
DUX4Q9UBX2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DUX4Q9UBX2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DUX4Q9UBX2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DUX4Q9UBX2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DUX4Q9UBX2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 AC096631.2-201ENST00000436136 790 ntBASIC18.58■□□□□ 0.56
DUX4Q9UBX2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.58■□□□□ 0.56
DUX4Q9UBX2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
DUX4Q9UBX2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.57■□□□□ 0.56
DUX4Q9UBX2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DUX4Q9UBX2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 ESRRAP2-201ENST00000418437 1549 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 SERBP1P1-201ENST00000396021 1160 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 DUX4L4-201ENST00000566884 1269 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 pRNA.6-201ENST00000610482 90 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 pRNA.5-201ENST00000612139 90 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 pRNA.11-201ENST00000618423 90 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 pRNA.13-201ENST00000619112 90 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 AC241377.3-202ENST00000626088 1088 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 AC241585.3-202ENST00000628937 1088 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 AC245100.8-202ENST00000629247 1058 ntBASIC18.56■□□□□ 0.56
DUX4Q9UBX2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DUX4Q9UBX2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms