Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PNMA6B-201ENST00000538162 1200 ntBASIC20.2■□□□□ 0.82
CHD8Q9HCK8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHD8Q9HCK8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD8Q9HCK8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD8Q9HCK8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.19■□□□□ 0.82
CHD8Q9HCK8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD8Q9HCK8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD8Q9HCK8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD8Q9HCK8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 AL121894.2-201ENST00000602977 491 ntBASIC20.16■□□□□ 0.82
CHD8Q9HCK8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD8Q9HCK8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 NTF6B-201ENST00000591913 560 ntBASIC20.15■□□□□ 0.82
CHD8Q9HCK8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD8Q9HCK8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHD8Q9HCK8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.14■□□□□ 0.82
CHD8Q9HCK8 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.14■□□□□ 0.82
CHD8Q9HCK8 AC060766.5-201ENST00000590539 871 ntBASIC20.14■□□□□ 0.82
CHD8Q9HCK8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD8Q9HCK8 UPK3BP1-201ENST00000428678 509 ntBASIC20.13■□□□□ 0.81
CHD8Q9HCK8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms