Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC4Q9H5U6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC4Q9H5U6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZCCHC4Q9H5U6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZCCHC4Q9H5U6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZCCHC4Q9H5U6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 AL031602.1-201ENST00000633169 911 ntBASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 AC133637.1-201ENST00000624115 1537 ntBASIC18.69■□□□□ 0.58
ZCCHC4Q9H5U6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZCCHC4Q9H5U6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 AC079089.2-201ENST00000531211 1277 ntBASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 LINC01006-201ENST00000333319 2292 ntBASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZCCHC4Q9H5U6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 FEM1AP1-201ENST00000431297 1995 ntBASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 KRT16P3-201ENST00000439127 1283 ntBASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 pRNA.6-201ENST00000610482 90 ntBASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 pRNA.5-201ENST00000612139 90 ntBASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 pRNA.11-201ENST00000618423 90 ntBASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 pRNA.13-201ENST00000619112 90 ntBASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 AC026471.6-201ENST00000622954 1905 ntBASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.66■□□□□ 0.58
ZCCHC4Q9H5U6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms