Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 RPP21-222ENST00000433076 577 ntTSL 2 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 pRNA.6-201ENST00000610482 90 ntBASIC12.62□□□□□ -0.39
LIMD2Q9BT23 pRNA.5-201ENST00000612139 90 ntBASIC12.62□□□□□ -0.39
LIMD2Q9BT23 pRNA.11-201ENST00000618423 90 ntBASIC12.62□□□□□ -0.39
LIMD2Q9BT23 pRNA.13-201ENST00000619112 90 ntBASIC12.62□□□□□ -0.39
LIMD2Q9BT23 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 AC133637.1-201ENST00000624115 1537 ntBASIC12.62□□□□□ -0.39
LIMD2Q9BT23 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 AC073130.3-201ENST00000624389 2278 ntBASIC12.62□□□□□ -0.39
LIMD2Q9BT23 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIMD2Q9BT23 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 AC099791.2-201ENST00000605725 427 ntBASIC12.61□□□□□ -0.39
LIMD2Q9BT23 AL138724.1-201ENST00000606771 1088 ntBASIC12.61□□□□□ -0.39
LIMD2Q9BT23 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LIMD2Q9BT23 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 SYT6-210ENST00000641643 1587 ntBASIC12.6□□□□□ -0.39
LIMD2Q9BT23 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.6□□□□□ -0.39
LIMD2Q9BT23 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 LINC00526-201ENST00000581067 1875 ntBASIC12.59□□□□□ -0.39
LIMD2Q9BT23 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC12.59□□□□□ -0.39
LIMD2Q9BT23 AC092053.2-201ENST00000640557 1818 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms