Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 LTB4R2-202ENST00000528054 3092 ntBASIC16.15■□□□□ 0.18
PACRGQ96M98 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PACRGQ96M98 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.15■□□□□ 0.18
PACRGQ96M98 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PACRGQ96M98 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.15■□□□□ 0.18
PACRGQ96M98 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.15■□□□□ 0.18
PACRGQ96M98 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PACRGQ96M98 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PACRGQ96M98 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 AC004408.2-201ENST00000623613 2777 ntBASIC16.14■□□□□ 0.17
PACRGQ96M98 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.14■□□□□ 0.17
PACRGQ96M98 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.14■□□□□ 0.17
PACRGQ96M98 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PACRGQ96M98 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PACRGQ96M98 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.14■□□□□ 0.17
PACRGQ96M98 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.14■□□□□ 0.17
PACRGQ96M98 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PACRGQ96M98 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 AL359258.2-201ENST00000564063 1566 ntBASIC16.13■□□□□ 0.17
PACRGQ96M98 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.13■□□□□ 0.17
PACRGQ96M98 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.13■□□□□ 0.17
PACRGQ96M98 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.13■□□□□ 0.17
PACRGQ96M98 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACRGQ96M98 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.13■□□□□ 0.17
PACRGQ96M98 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.13■□□□□ 0.17
PACRGQ96M98 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PACRGQ96M98 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.12■□□□□ 0.17
PACRGQ96M98 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.12■□□□□ 0.17
PACRGQ96M98 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 MIR219A2-201ENST00000608502 1504 ntBASIC16.12■□□□□ 0.17
PACRGQ96M98 TNXA-203ENST00000507684 2038 ntBASIC16.12■□□□□ 0.17
PACRGQ96M98 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.12■□□□□ 0.17
PACRGQ96M98 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PACRGQ96M98 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.12■□□□□ 0.17
PACRGQ96M98 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACRGQ96M98 GABARAPL3-202ENST00000624044 1851 ntBASIC16.12■□□□□ 0.17
PACRGQ96M98 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PACRGQ96M98 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACRGQ96M98 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.11■□□□□ 0.17
PACRGQ96M98 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.11■□□□□ 0.17
PACRGQ96M98 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.11■□□□□ 0.17
PACRGQ96M98 AC087742.1-201ENST00000575880 1738 ntBASIC16.11■□□□□ 0.17
PACRGQ96M98 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACRGQ96M98 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.11■□□□□ 0.17
PACRGQ96M98 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PACRGQ96M98 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACRGQ96M98 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACRGQ96M98 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PACRGQ96M98 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PACRGQ96M98 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms