Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF25Q96BH1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RNF25Q96BH1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF25Q96BH1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF25Q96BH1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF25Q96BH1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF25Q96BH1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF25Q96BH1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
RNF25Q96BH1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF25Q96BH1 AP005435.1-201ENST00000529293 1178 ntBASIC22.34■■□□□ 1.17
RNF25Q96BH1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RNF25Q96BH1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF25Q96BH1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF25Q96BH1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF25Q96BH1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF25Q96BH1 Z98882.1-201ENST00000622160 2253 ntBASIC22.33■■□□□ 1.17
RNF25Q96BH1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF25Q96BH1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.33■■□□□ 1.17
RNF25Q96BH1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RNF25Q96BH1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF25Q96BH1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.33■■□□□ 1.17
RNF25Q96BH1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF25Q96BH1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.33■■□□□ 1.17
RNF25Q96BH1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF25Q96BH1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RNF25Q96BH1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
RNF25Q96BH1 AC073130.3-201ENST00000624389 2278 ntBASIC22.33■■□□□ 1.16
RNF25Q96BH1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RNF25Q96BH1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF25Q96BH1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RNF25Q96BH1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF25Q96BH1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF25Q96BH1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF25Q96BH1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RNF25Q96BH1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF25Q96BH1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
RNF25Q96BH1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF25Q96BH1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF25Q96BH1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF25Q96BH1 MIR4767-201ENST00000582827 78 ntBASIC22.32■■□□□ 1.16
RNF25Q96BH1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF25Q96BH1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF25Q96BH1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF25Q96BH1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF25Q96BH1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF25Q96BH1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RNF25Q96BH1 STK33P1-201ENST00000423835 1218 ntBASIC22.31■■□□□ 1.16
RNF25Q96BH1 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC22.31■■□□□ 1.16
RNF25Q96BH1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF25Q96BH1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RNF25Q96BH1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF25Q96BH1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF25Q96BH1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RNF25Q96BH1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF25Q96BH1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
RNF25Q96BH1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF25Q96BH1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF25Q96BH1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF25Q96BH1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF25Q96BH1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF25Q96BH1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RNF25Q96BH1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF25Q96BH1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF25Q96BH1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF25Q96BH1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF25Q96BH1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF25Q96BH1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF25Q96BH1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF25Q96BH1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF25Q96BH1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
RNF25Q96BH1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF25Q96BH1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF25Q96BH1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF25Q96BH1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF25Q96BH1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RNF25Q96BH1 AC024257.2-201ENST00000549699 147 ntBASIC22.29■■□□□ 1.16
RNF25Q96BH1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF25Q96BH1 AL136162.1-201ENST00000607711 1078 ntBASIC22.29■■□□□ 1.16
RNF25Q96BH1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF25Q96BH1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF25Q96BH1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF25Q96BH1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF25Q96BH1 AP004607.7-201ENST00000527152 1677 ntBASIC22.29■■□□□ 1.16
RNF25Q96BH1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RNF25Q96BH1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms