Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LINC01561Q8N1V8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01561Q8N1V8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 AL049796.1-201ENST00000565336 1766 ntBASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 AL391422.3-201ENST00000603791 2761 ntBASIC14.27□□□□□ -0.12
LINC01561Q8N1V8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01561Q8N1V8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 AC026471.6-201ENST00000622954 1905 ntBASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01561Q8N1V8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms