Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.7■■□□□ 1.39
CCDC65Q8IXS2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCDC65Q8IXS2 BX005040.4-201ENST00000637145 1518 ntBASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 AC244015.2-201ENST00000616358 1861 ntBASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC65Q8IXS2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 AC012414.1-201ENST00000556676 535 ntBASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC65Q8IXS2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 AL354811.1-201ENST00000610286 706 ntBASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC65Q8IXS2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 AL358852.1-201ENST00000623174 1268 ntBASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 PKD1P6-201ENST00000343738 4769 ntBASIC23.67■■□□□ 1.38
CCDC65Q8IXS2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 AC003102.1-202ENST00000563394 1796 ntBASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 IRS3P-201ENST00000223076 1006 ntBASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CCDC65Q8IXS2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC65Q8IXS2 AC005224.4-201ENST00000583262 1652 ntBASIC23.64■■□□□ 1.38
CCDC65Q8IXS2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CCDC65Q8IXS2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.64■■□□□ 1.38
CCDC65Q8IXS2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC65Q8IXS2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC65Q8IXS2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC65Q8IXS2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms