Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 NOP56-216ENST00000492135 1143 ntTSL 1 (best)28.39■■■□□ 2.141e-6■■□□□ 13.9
PABPN1Q86U42 CENPX-211ENST00000585091 739 ntTSL 342.27■■■■■ 4.362e-6■■□□□ 13.9
PABPN1Q86U42 PTPN18-211ENST00000481492 1394 ntTSL 241.35■■■■■ 4.212e-6■■□□□ 13.9
PABPN1Q86U42 PTPN18-203ENST00000409022 993 ntTSL 337.31■■■■□ 3.562e-6■■□□□ 13.9
PABPN1Q86U42 PTPN18-207ENST00000462321 1717 ntTSL 236.17■■■■□ 3.382e-6■■□□□ 13.9
PABPN1Q86U42 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC35.7■■■■□ 3.312e-6■■□□□ 13.9
PABPN1Q86U42 SUGP1-204ENST00000585763 826 ntTSL 534.23■■■■□ 3.072e-6■■□□□ 13.9
PABPN1Q86U42 TRIM28-215ENST00000601150 915 ntTSL 333.3■■■□□ 2.922e-6■■□□□ 13.9
PABPN1Q86U42 BAX-208ENST00000503726 488 ntTSL 232.54■■■□□ 2.82e-6■■□□□ 13.9
PABPN1Q86U42 TRIM28-205ENST00000595028 486 ntTSL 230.98■■■□□ 2.552e-6■■□□□ 13.9
PABPN1Q86U42 DOCK6-214ENST00000592403 459 ntTSL 329.76■■■□□ 2.352e-6■■□□□ 13.9
PABPN1Q86U42 BAX-212ENST00000515540 300 ntTSL 329.13■■■□□ 2.252e-6■■□□□ 13.9
PABPN1Q86U42 SFSWAP-206ENST00000537582 1576 ntTSL 229.13■■■□□ 2.252e-6■■□□□ 13.9
PABPN1Q86U42 SUGP1-209ENST00000588731 2282 ntTSL 1 (best)28.49■■■□□ 2.152e-6■■□□□ 13.9
PABPN1Q86U42 SUGP1-212ENST00000591007 1377 ntTSL 1 (best)26.73■■□□□ 1.872e-6■■□□□ 13.9
PABPN1Q86U42 SUGP1-206ENST00000587119 2177 ntTSL 226.21■■□□□ 1.792e-6■■□□□ 13.9
PABPN1Q86U42 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.672e-6■■□□□ 13.9
PABPN1Q86U42 SUGP1-205ENST00000586387 626 ntTSL 325.03■■□□□ 1.62e-6■■□□□ 13.9
PABPN1Q86U42 SUGP1-210ENST00000589144 2066 ntTSL 1 (best)24.42■■□□□ 1.52e-6■■□□□ 13.9
PABPN1Q86U42 DOCK6-209ENST00000588429 566 ntTSL 424.12■■□□□ 1.452e-6■■□□□ 13.9
PABPN1Q86U42 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.182e-6■■□□□ 13.9
PABPN1Q86U42 MYO19-220ENST00000620567 1038 ntTSL 220.49■□□□□ 0.873e-6■■□□□ 13.9
PABPN1Q86U42 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.742e-6■■□□□ 13.9
PABPN1Q86U42 INTS3-202ENST00000368669 2889 ntTSL 218.71■□□□□ 0.592e-6■■□□□ 13.9
PABPN1Q86U42 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.452e-6■■□□□ 13.9
PABPN1Q86U42 INTS3-203ENST00000368670 3047 ntTSL 216.46■□□□□ 0.232e-6■■□□□ 13.9
PABPN1Q86U42 CHD4-205ENST00000536301 107 ntTSL 311.77□□□□□ -0.532e-6■■□□□ 13.9
PABPN1Q86U42 UBXN4-208ENST00000490163 3394 ntTSL 25.59□□□□□ -1.512e-6■■□□□ 13.9
PABPN1Q86U42 FBXO31-204ENST00000565593 2717 ntTSL 529.63■■■□□ 2.339e-7■■□□□ 13.9
PABPN1Q86U42 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.869e-7■■□□□ 13.9
PABPN1Q86U42 MTA1-206ENST00000434050 2050 ntTSL 1 (best)32.66■■■□□ 2.826e-7■■□□□ 13.9
PABPN1Q86U42 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC27.02■■□□□ 1.926e-7■■□□□ 13.9
PABPN1Q86U42 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC24.74■■□□□ 1.556e-7■■□□□ 13.9
PABPN1Q86U42 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC23.11■■□□□ 1.296e-7■■□□□ 13.9
PABPN1Q86U42 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.126e-7■■□□□ 13.9
PABPN1Q86U42 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC16.97■□□□□ 0.318e-9■■□□□ 13.9
PABPN1Q86U42 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC11.48□□□□□ -0.578e-9■■□□□ 13.9
PABPN1Q86U42 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.668e-9■■□□□ 13.9
PABPN1Q86U42 NEDD4L-229ENST00000590506 2743 ntTSL 210.29□□□□□ -0.768e-9■■□□□ 13.9
PABPN1Q86U42 MXD3-207ENST00000509339 579 ntTSL 348.24■■■■■ 5.315e-7■■□□□ 13.9
PABPN1Q86U42 ENTPD6-211ENST00000435520 878 ntTSL 339.62■■■■□ 3.935e-7■■□□□ 13.9
PABPN1Q86U42 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC39.26■■■■□ 3.885e-7■■□□□ 13.9
PABPN1Q86U42 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.641e-7■■□□□ 13.9
PABPN1Q86U42 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC34.35■■■■□ 3.091e-7■■□□□ 13.9
PABPN1Q86U42 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.915e-7■■□□□ 13.9
PABPN1Q86U42 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC31.76■■■□□ 2.671e-7■■□□□ 13.9
PABPN1Q86U42 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC31.35■■■□□ 2.611e-7■■□□□ 13.9
PABPN1Q86U42 AGER-211ENST00000473619 932 ntTSL 1 (best)31.22■■■□□ 2.591e-7■■□□□ 13.9
PABPN1Q86U42 AGER-213ENST00000488669 887 ntTSL 1 (best)31.22■■■□□ 2.591e-7■■□□□ 13.9
PABPN1Q86U42 AGER-203ENST00000375065 665 ntTSL 2 BASIC31.09■■■□□ 2.571e-7■■□□□ 13.9
PABPN1Q86U42 AGER-206ENST00000375070 1463 ntTSL 5 BASIC29.96■■■□□ 2.391e-7■■□□□ 13.9
PABPN1Q86U42 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC29.96■■■□□ 2.391e-7■■□□□ 13.9
PABPN1Q86U42 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.385e-7■■□□□ 13.9
PABPN1Q86U42 THOC5-215ENST00000488052 526 ntTSL 329.87■■■□□ 2.373e-8■■□□□ 13.9
PABPN1Q86U42 AGER-212ENST00000484849 1597 ntTSL 1 (best)28.9■■■□□ 2.221e-7■■□□□ 13.9
PABPN1Q86U42 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC28.44■■■□□ 2.141e-7■■□□□ 13.9
PABPN1Q86U42 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.585e-7■■□□□ 13.9
PABPN1Q86U42 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.165e-7■■□□□ 13.9
PABPN1Q86U42 CSF3R-209ENST00000469380 321 ntTSL 219.92■□□□□ 0.785e-7■■□□□ 13.9
PABPN1Q86U42 HABP4-203ENST00000466976 3150 ntTSL 218.52■□□□□ 0.555e-7■■□□□ 13.9
PABPN1Q86U42 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.217e-7■■□□□ 13.9
PABPN1Q86U42 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.877e-7■■□□□ 13.9
PABPN1Q86U42 COL9A3-202ENST00000452372 596 ntTSL 540.31■■■■■ 4.049e-9■■□□□ 13.9
PABPN1Q86U42 DAZAP1-208ENST00000589874 3642 nt21.98■■□□□ 1.115e-8■■□□□ 13.9
PABPN1Q86U42 CHKB-CPT1B-203ENST00000492556 4906 ntTSL 229.65■■■□□ 2.341e-6■■□□□ 13.8
PABPN1Q86U42 DHRS2-205ENST00000553896 1352 ntTSL 1 (best)38.79■■■■□ 3.81e-17■■□□□ 13.8
PABPN1Q86U42 RHOT2-216ENST00000567017 1094 ntTSL 547.41■■■■■ 5.186e-7■■□□□ 13.8
PABPN1Q86U42 RHOT2-210ENST00000563637 993 ntTSL 541.38■■■■■ 4.216e-7■■□□□ 13.8
PABPN1Q86U42 MCRIP1-209ENST00000575090 752 ntTSL 345.78■■■■■ 4.922e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC45.28■■■■■ 4.842e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC43.39■■■■■ 4.542e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC40.85■■■■■ 4.132e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC40.2■■■■■ 4.032e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.812e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.72e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC34.81■■■■□ 3.162e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.292e-6■■□□□ 13.8
PABPN1Q86U42 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.782e-6■■□□□ 13.8
PABPN1Q86U42 MMS19-215ENST00000478452 835 ntTSL 218.48■□□□□ 0.554e-7■■□□□ 13.8
PABPN1Q86U42 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC39.6■■■■□ 3.934e-7■■□□□ 13.8
PABPN1Q86U42 MED24-212ENST00000501516 3037 ntTSL 5 BASIC19.73■□□□□ 0.751e-6■■□□□ 13.8
PABPN1Q86U42 MED24-203ENST00000394127 3456 ntTSL 2 BASIC18.77■□□□□ 0.591e-6■■□□□ 13.8
PABPN1Q86U42 MED24-214ENST00000535508 3334 ntTSL 218.05■□□□□ 0.481e-6■■□□□ 13.8
PABPN1Q86U42 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC18.04■□□□□ 0.481e-6■■□□□ 13.8
PABPN1Q86U42 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.411e-6■■□□□ 13.8
PABPN1Q86U42 MED24-201ENST00000356271 3446 ntTSL 2 BASIC17.5■□□□□ 0.391e-6■■□□□ 13.8
PABPN1Q86U42 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC17.4■□□□□ 0.381e-6■■□□□ 13.8
PABPN1Q86U42 THOC5-210ENST00000443089 786 ntTSL 221.08■□□□□ 0.971e-6■■□□□ 13.8
PABPN1Q86U42 PCYT2-207ENST00000571581 999 ntTSL 553.47■■■■■ 6.152e-7■■□□□ 13.8
PABPN1Q86U42 PCYT2-213ENST00000573401 1028 ntTSL 549.82■■■■■ 5.572e-7■■□□□ 13.8
PABPN1Q86U42 COL6A1-202ENST00000463060 863 ntTSL 526.77■■□□□ 1.882e-11■■□□□ 13.8
PABPN1Q86U42 RRBP1-207ENST00000468428 2200 ntTSL 225.99■■□□□ 1.751e-9■■□□□ 13.8
PABPN1Q86U42 RHOT2-225ENST00000570092 674 ntTSL 349.78■■■■■ 5.566e-7■■□□□ 13.8
PABPN1Q86U42 RHOT2-207ENST00000562708 672 ntTSL 548.56■■■■■ 5.366e-7■■□□□ 13.8
PABPN1Q86U42 RHOT2-206ENST00000562598 612 ntTSL 335.28■■■■□ 3.246e-7■■□□□ 13.8
PABPN1Q86U42 SMPD4-215ENST00000457039 940 ntTSL 527.4■■□□□ 1.983e-6■■□□□ 13.8
PABPN1Q86U42 SUPT6H-206ENST00000581510 1194 ntTSL 533.74■■■□□ 2.994e-7■■□□□ 13.8
PABPN1Q86U42 SAT1-203ENST00000379254 868 ntTSL 3 BASIC27.19■■□□□ 1.942e-12■■□□□ 13.7
PABPN1Q86U42 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.942e-12■■□□□ 13.7
PABPN1Q86U42 SAT1-209ENST00000489394 1135 ntTSL 222.87■■□□□ 1.252e-12■■□□□ 13.7
Retrieved 100 of 8,254 protein–RNA pairs in 179.7 ms