Protein–RNA interactions for Protein: Q6ZSJ9

SHISA6, Protein shisa-6 homolog, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6Q6ZSJ9 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.07■□□□□ 0.8
SHISA6Q6ZSJ9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.07■□□□□ 0.8
SHISA6Q6ZSJ9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.07■□□□□ 0.8
SHISA6Q6ZSJ9 AC073111.5-205ENST00000641717 521 ntBASIC20.07■□□□□ 0.8
SHISA6Q6ZSJ9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHISA6Q6ZSJ9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHISA6Q6ZSJ9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SHISA6Q6ZSJ9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 AP001160.3-201ENST00000601484 763 ntBASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SHISA6Q6ZSJ9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 CDCA4P2-201ENST00000441182 718 ntBASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 UBE2DNL-204ENST00000602536 740 ntBASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA6Q6ZSJ9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SHISA6Q6ZSJ9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SHISA6Q6ZSJ9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA6Q6ZSJ9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SHISA6Q6ZSJ9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SHISA6Q6ZSJ9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SHISA6Q6ZSJ9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHISA6Q6ZSJ9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms