Protein–RNA interactions for Protein: Q2NL98

VMAC, Vimentin-type intermediate filament-associated coiled-coil protein, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMACQ2NL98 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.98■□□□□ 0.79
VMACQ2NL98 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.98■□□□□ 0.79
VMACQ2NL98 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMACQ2NL98 AC073130.3-201ENST00000624389 2278 ntBASIC19.98■□□□□ 0.79
VMACQ2NL98 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMACQ2NL98 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
VMACQ2NL98 OXCT2P1-201ENST00000447263 1535 ntBASIC19.97■□□□□ 0.79
VMACQ2NL98 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VMACQ2NL98 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMACQ2NL98 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.97■□□□□ 0.79
VMACQ2NL98 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.97■□□□□ 0.79
VMACQ2NL98 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VMACQ2NL98 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VMACQ2NL98 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMACQ2NL98 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMACQ2NL98 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
VMACQ2NL98 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMACQ2NL98 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.96■□□□□ 0.79
VMACQ2NL98 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.96■□□□□ 0.79
VMACQ2NL98 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VMACQ2NL98 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.96■□□□□ 0.79
VMACQ2NL98 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.96■□□□□ 0.79
VMACQ2NL98 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMACQ2NL98 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VMACQ2NL98 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VMACQ2NL98 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMACQ2NL98 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.96■□□□□ 0.79
VMACQ2NL98 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMACQ2NL98 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMACQ2NL98 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VMACQ2NL98 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.95■□□□□ 0.78
VMACQ2NL98 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.95■□□□□ 0.78
VMACQ2NL98 MIR3621-201ENST00000580529 85 ntBASIC19.95■□□□□ 0.78
VMACQ2NL98 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 AC092171.4-201ENST00000609130 632 ntBASIC19.95■□□□□ 0.78
VMACQ2NL98 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VMACQ2NL98 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.95■□□□□ 0.78
VMACQ2NL98 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VMACQ2NL98 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
VMACQ2NL98 AL157384.1-201ENST00000445995 2473 ntBASIC19.94■□□□□ 0.78
VMACQ2NL98 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.94■□□□□ 0.78
VMACQ2NL98 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.94■□□□□ 0.78
VMACQ2NL98 AL034346.1-201ENST00000568244 1277 ntBASIC19.94■□□□□ 0.78
VMACQ2NL98 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.94■□□□□ 0.78
VMACQ2NL98 AC010525.1-201ENST00000585559 441 ntBASIC19.94■□□□□ 0.78
VMACQ2NL98 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.94■□□□□ 0.78
VMACQ2NL98 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.94■□□□□ 0.78
VMACQ2NL98 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VMACQ2NL98 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VMACQ2NL98 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VMACQ2NL98 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
VMACQ2NL98 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VMACQ2NL98 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.93■□□□□ 0.78
VMACQ2NL98 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMACQ2NL98 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.93■□□□□ 0.78
VMACQ2NL98 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMACQ2NL98 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMACQ2NL98 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMACQ2NL98 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VMACQ2NL98 SRD5A1P1-201ENST00000442297 786 ntBASIC19.93■□□□□ 0.78
VMACQ2NL98 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMACQ2NL98 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VMACQ2NL98 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.93■□□□□ 0.78
VMACQ2NL98 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
VMACQ2NL98 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VMACQ2NL98 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.92■□□□□ 0.78
VMACQ2NL98 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.92■□□□□ 0.78
VMACQ2NL98 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VMACQ2NL98 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.92■□□□□ 0.78
VMACQ2NL98 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VMACQ2NL98 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VMACQ2NL98 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VMACQ2NL98 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VMACQ2NL98 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VMACQ2NL98 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms