Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCL20P78556 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL20P78556 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL20P78556 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCL20P78556 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 OXCT2P1-201ENST00000447263 1535 ntBASIC16.8■□□□□ 0.28
CCL20P78556 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL20P78556 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL20P78556 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL20P78556 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL20P78556 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL20P78556 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL20P78556 AL049796.1-201ENST00000565336 1766 ntBASIC16.8■□□□□ 0.28
CCL20P78556 AC004448.1-201ENST00000458332 883 ntBASIC16.8■□□□□ 0.28
CCL20P78556 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL20P78556 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCL20P78556 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL20P78556 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL20P78556 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL20P78556 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL20P78556 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CCL20P78556 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
CCL20P78556 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL20P78556 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL20P78556 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL20P78556 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL20P78556 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL20P78556 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCL20P78556 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL20P78556 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 LONRF2P2-201ENST00000439212 571 ntBASIC16.79■□□□□ 0.28
CCL20P78556 SPCS2P3-201ENST00000500401 656 ntBASIC16.79■□□□□ 0.28
CCL20P78556 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL20P78556 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCL20P78556 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL20P78556 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL20P78556 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL20P78556 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL20P78556 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL20P78556 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL20P78556 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL20P78556 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL20P78556 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL20P78556 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCL20P78556 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL20P78556 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCL20P78556 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCL20P78556 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCL20P78556 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL20P78556 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL20P78556 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL20P78556 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCL20P78556 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL20P78556 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL20P78556 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL20P78556 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL20P78556 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL20P78556 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL20P78556 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CCL20P78556 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL20P78556 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCL20P78556 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL20P78556 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL20P78556 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL20P78556 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCL20P78556 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
CCL20P78556 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCL20P78556 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL20P78556 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.76■□□□□ 0.27
CCL20P78556 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms