Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC080038.3-201ENST00000623346 1952 ntBASIC19.89■□□□□ 0.77
RPS3AP61247 AL136967.2-201ENST00000623968 743 ntBASIC19.89■□□□□ 0.77
RPS3AP61247 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.89■□□□□ 0.77
RPS3AP61247 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS3AP61247 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS3AP61247 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RPS3AP61247 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RPS3AP61247 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS3AP61247 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RPS3AP61247 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS3AP61247 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS3AP61247 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.88■□□□□ 0.77
RPS3AP61247 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RPS3AP61247 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS3AP61247 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.88■□□□□ 0.77
RPS3AP61247 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS3AP61247 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS3AP61247 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS3AP61247 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RPS3AP61247 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RPS3AP61247 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RPS3AP61247 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RPS3AP61247 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS3AP61247 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RPS3AP61247 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS3AP61247 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.87■□□□□ 0.77
RPS3AP61247 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.87■□□□□ 0.77
RPS3AP61247 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.87■□□□□ 0.77
RPS3AP61247 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.87■□□□□ 0.77
RPS3AP61247 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RPS3AP61247 AC099791.1-201ENST00000416440 715 ntBASIC19.87■□□□□ 0.77
RPS3AP61247 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.87■□□□□ 0.77
RPS3AP61247 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RPS3AP61247 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.87■□□□□ 0.77
RPS3AP61247 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RPS3AP61247 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPS3AP61247 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS3AP61247 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RPS3AP61247 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPS3AP61247 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS3AP61247 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS3AP61247 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RPS3AP61247 OR2I1P-207ENST00000453522 948 ntBASIC19.86■□□□□ 0.77
RPS3AP61247 CA15P2-201ENST00000611168 834 ntBASIC19.86■□□□□ 0.77
RPS3AP61247 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.86■□□□□ 0.77
RPS3AP61247 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPS3AP61247 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS3AP61247 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPS3AP61247 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.85■□□□□ 0.77
RPS3AP61247 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS3AP61247 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPS3AP61247 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
RPS3AP61247 AC126544.1-201ENST00000580842 1059 ntBASIC19.85■□□□□ 0.77
RPS3AP61247 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.85■□□□□ 0.77
RPS3AP61247 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.85■□□□□ 0.77
RPS3AP61247 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS3AP61247 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.85■□□□□ 0.77
RPS3AP61247 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RPS3AP61247 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPS3AP61247 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPS3AP61247 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.84■□□□□ 0.77
RPS3AP61247 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.84■□□□□ 0.77
RPS3AP61247 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.84■□□□□ 0.77
RPS3AP61247 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RPS3AP61247 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.84■□□□□ 0.77
RPS3AP61247 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPS3AP61247 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.84■□□□□ 0.77
RPS3AP61247 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RPS3AP61247 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RPS3AP61247 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms