Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
EPHA4P54764 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.59■□□□□ 0.89
EPHA4P54764 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.59■□□□□ 0.89
EPHA4P54764 AC231657.2-201ENST00000624556 255 ntBASIC20.59■□□□□ 0.89
EPHA4P54764 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA4P54764 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
EPHA4P54764 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.58■□□□□ 0.89
EPHA4P54764 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
EPHA4P54764 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.58■□□□□ 0.89
EPHA4P54764 AC006970.2-201ENST00000450065 779 ntBASIC20.58■□□□□ 0.89
EPHA4P54764 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.58■□□□□ 0.89
EPHA4P54764 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.58■□□□□ 0.89
EPHA4P54764 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.58■□□□□ 0.89
EPHA4P54764 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA4P54764 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.88
EPHA4P54764 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHA4P54764 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.58■□□□□ 0.88
EPHA4P54764 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EPHA4P54764 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHA4P54764 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.57■□□□□ 0.88
EPHA4P54764 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHA4P54764 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 CROCCP5-201ENST00000436658 830 ntBASIC20.57■□□□□ 0.88
EPHA4P54764 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.57■□□□□ 0.88
EPHA4P54764 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHA4P54764 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
EPHA4P54764 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA4P54764 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHA4P54764 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHA4P54764 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHA4P54764 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 HLA-L-209ENST00000420110 1011 ntBASIC20.56■□□□□ 0.88
EPHA4P54764 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.56■□□□□ 0.88
EPHA4P54764 DUX4L16-201ENST00000555130 1264 ntBASIC20.56■□□□□ 0.88
EPHA4P54764 SLC7A5P1-201ENST00000568957 537 ntBASIC20.56■□□□□ 0.88
EPHA4P54764 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.56■□□□□ 0.88
EPHA4P54764 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHA4P54764 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA4P54764 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.56■□□□□ 0.88
EPHA4P54764 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHA4P54764 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.55■□□□□ 0.88
EPHA4P54764 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.55■□□□□ 0.88
EPHA4P54764 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA4P54764 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA4P54764 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA4P54764 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.55■□□□□ 0.88
EPHA4P54764 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA4P54764 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHA4P54764 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHA4P54764 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHA4P54764 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
EPHA4P54764 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.55■□□□□ 0.88
EPHA4P54764 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA4P54764 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA4P54764 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EPHA4P54764 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA4P54764 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EPHA4P54764 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms