Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
GTF2A1P52655 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GTF2A1P52655 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2A1P52655 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
GTF2A1P52655 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
GTF2A1P52655 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
GTF2A1P52655 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.87■□□□□ 0.93
GTF2A1P52655 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.87■□□□□ 0.93
GTF2A1P52655 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.87■□□□□ 0.93
GTF2A1P52655 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.87■□□□□ 0.93
GTF2A1P52655 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2A1P52655 NOC2LP1-202ENST00000452600 2235 ntBASIC20.86■□□□□ 0.93
GTF2A1P52655 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.86■□□□□ 0.93
GTF2A1P52655 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.86■□□□□ 0.93
GTF2A1P52655 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
GTF2A1P52655 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.86■□□□□ 0.93
GTF2A1P52655 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.86■□□□□ 0.93
GTF2A1P52655 AC106820.2-201ENST00000563775 3264 ntBASIC20.86■□□□□ 0.93
GTF2A1P52655 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GTF2A1P52655 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
GTF2A1P52655 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GTF2A1P52655 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GTF2A1P52655 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF2A1P52655 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GTF2A1P52655 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.85■□□□□ 0.93
GTF2A1P52655 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF2A1P52655 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.85■□□□□ 0.93
GTF2A1P52655 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.85■□□□□ 0.93
GTF2A1P52655 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.85■□□□□ 0.93
GTF2A1P52655 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF2A1P52655 RPS2P35-201ENST00000443417 897 ntBASIC20.85■□□□□ 0.93
GTF2A1P52655 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.85■□□□□ 0.93
GTF2A1P52655 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GTF2A1P52655 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF2A1P52655 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GTF2A1P52655 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GTF2A1P52655 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.84■□□□□ 0.93
GTF2A1P52655 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GTF2A1P52655 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GTF2A1P52655 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
GTF2A1P52655 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.84■□□□□ 0.93
GTF2A1P52655 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.84■□□□□ 0.93
GTF2A1P52655 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.84■□□□□ 0.93
GTF2A1P52655 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.84■□□□□ 0.93
GTF2A1P52655 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
GTF2A1P52655 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.84■□□□□ 0.93
GTF2A1P52655 TNXA-203ENST00000507684 2038 ntBASIC20.83■□□□□ 0.93
GTF2A1P52655 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GTF2A1P52655 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.83■□□□□ 0.93
GTF2A1P52655 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
GTF2A1P52655 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GTF2A1P52655 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GTF2A1P52655 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GTF2A1P52655 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
GTF2A1P52655 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.83■□□□□ 0.92
GTF2A1P52655 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
GTF2A1P52655 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
GTF2A1P52655 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GTF2A1P52655 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms