Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCP4P48539 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCP4P48539 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCP4P48539 AL049812.1-201ENST00000432563 2267 ntBASIC14.87□□□□□ -0.03
PCP4P48539 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCP4P48539 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
PCP4P48539 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC14.87□□□□□ -0.03
PCP4P48539 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC14.87□□□□□ -0.03
PCP4P48539 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCP4P48539 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.87□□□□□ -0.03
PCP4P48539 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.87□□□□□ -0.03
PCP4P48539 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCP4P48539 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCP4P48539 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCP4P48539 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCP4P48539 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCP4P48539 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCP4P48539 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.86□□□□□ -0.03
PCP4P48539 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PCP4P48539 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PCP4P48539 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCP4P48539 PLK5-205ENST00000642079 1969 ntBASIC14.86□□□□□ -0.03
PCP4P48539 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCP4P48539 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PCP4P48539 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.86□□□□□ -0.03
PCP4P48539 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCP4P48539 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 PRORSD1P-202ENST00000563365 2154 ntBASIC14.85□□□□□ -0.03
PCP4P48539 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.85□□□□□ -0.03
PCP4P48539 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.85□□□□□ -0.03
PCP4P48539 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.85□□□□□ -0.03
PCP4P48539 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCP4P48539 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.85□□□□□ -0.03
PCP4P48539 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4P48539 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.85□□□□□ -0.03
PCP4P48539 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PCP4P48539 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
PCP4P48539 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.84□□□□□ -0.03
PCP4P48539 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.84□□□□□ -0.03
PCP4P48539 AC141586.4-201ENST00000624558 1573 ntBASIC14.84□□□□□ -0.03
PCP4P48539 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.84□□□□□ -0.03
PCP4P48539 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.84□□□□□ -0.03
PCP4P48539 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms