Protein–RNA interactions for Protein: P47024

TY4B-J, Transposon Ty4-J Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-JP47024 BPT1YLL015W 4680 nt2.77□□□□□ -1.97
TY4B-JP47024 VPS13YLL040C 9435 nt2.77□□□□□ -1.97
TY4B-JP47024 DUG2YBR281C 2637 nt2.77□□□□□ -1.97
TY4B-JP47024 TCD1YHR003C 1290 nt2.77□□□□□ -1.97
TY4B-JP47024 RPS28BYLR264W 204 nt2.77□□□□□ -1.97
TY4B-JP47024 RAS1YOR101W 930 nt2.77□□□□□ -1.97
TY4B-JP47024 KDX1YKL161C 1302 nt2.76□□□□□ -1.97
TY4B-JP47024 CST9YLR394W 1449 nt2.76□□□□□ -1.97
TY4B-JP47024 SMC2YFR031C 3513 nt2.76□□□□□ -1.97
TY4B-JP47024 STU1YBL034C 4542 nt2.76□□□□□ -1.97
TY4B-JP47024 NSA1YGL111W 1392 nt2.76□□□□□ -1.97
TY4B-JP47024 YDR442WYDR442W 393 nt2.76□□□□□ -1.97
TY4B-JP47024 PDX1YGR193C 1233 nt2.76□□□□□ -1.97
TY4B-JP47024 YJL052C-AYJL052C-A 120 nt2.76□□□□□ -1.97
TY4B-JP47024 CPR7YJR032W 1182 nt2.76□□□□□ -1.97
TY4B-JP47024 SPS18YNL204C 903 nt2.76□□□□□ -1.97
TY4B-JP47024 MSS18YPR134W 807 nt2.76□□□□□ -1.97
TY4B-JP47024 KAP104YBR017C 2757 nt2.76□□□□□ -1.97
TY4B-JP47024 YBL005W-AYBL005W-A 1323 nt2.76□□□□□ -1.97
TY4B-JP47024 YMR046CYMR046C 1323 nt2.76□□□□□ -1.97
TY4B-JP47024 NVJ1YHR195W 966 nt2.75□□□□□ -1.97
TY4B-JP47024 YBR300CYBR300C 498 nt2.75□□□□□ -1.97
TY4B-JP47024 IKS1YJL057C 2004 nt2.75□□□□□ -1.97
TY4B-JP47024 FMP10YER182W 735 nt2.75□□□□□ -1.97
TY4B-JP47024 MET14YKL001C 609 nt2.75□□□□□ -1.97
TY4B-JP47024 TVP18YMR071C 504 nt2.75□□□□□ -1.97
TY4B-JP47024 MF(ALPHA)1YPL187W 498 nt2.75□□□□□ -1.97
TY4B-JP47024 PEX8YGR077C 1770 nt2.75□□□□□ -1.97
TY4B-JP47024 PDC2YDR081C 2778 nt2.74□□□□□ -1.97
TY4B-JP47024 CBP1YJL209W 1965 nt2.74□□□□□ -1.97
TY4B-JP47024 RRM3YHR031C 2172 nt2.74□□□□□ -1.97
TY4B-JP47024 ATG17YLR423C 1254 nt2.74□□□□□ -1.97
TY4B-JP47024 YTH1YPR107C 627 nt2.74□□□□□ -1.97
TY4B-JP47024 YBR103C-AYBR103C-A 144 nt2.74□□□□□ -1.97
TY4B-JP47024 YIL092WYIL092W 1902 nt2.73□□□□□ -1.97
TY4B-JP47024 TAF6YGL112C 1551 nt2.73□□□□□ -1.97
TY4B-JP47024 LST7YGR057C 729 nt2.73□□□□□ -1.97
TY4B-JP47024 CBP2YHL038C 1893 nt2.73□□□□□ -1.97
TY4B-JP47024 CUS2YNL286W 858 nt2.73□□□□□ -1.97
TY4B-JP47024 RPC34YNR003C 954 nt2.73□□□□□ -1.97
TY4B-JP47024 NEO1YIL048W 3456 nt2.73□□□□□ -1.97
TY4B-JP47024 SIP1YDR422C 2448 nt2.73□□□□□ -1.97
TY4B-JP47024 YDR535CYDR535C 501 nt2.72□□□□□ -1.97
TY4B-JP47024 YGL159WYGL159W 1113 nt2.72□□□□□ -1.97
TY4B-JP47024 RPL17BYJL177W 555 nt2.72□□□□□ -1.97
TY4B-JP47024 CYC1YJR048W 330 nt2.72□□□□□ -1.97
TY4B-JP47024 SRT1YMR101C 1032 nt2.72□□□□□ -1.97
TY4B-JP47024 PUF6YDR496C 1971 nt2.72□□□□□ -1.97
TY4B-JP47024 SRP68YPL243W 1800 nt2.72□□□□□ -1.97
TY4B-JP47024 YER133W-AYER133W-A 342 nt2.72□□□□□ -1.97
TY4B-JP47024 YKL131WYKL131W 522 nt2.72□□□□□ -1.97
TY4B-JP47024 TAE2YPL009C 3117 nt2.72□□□□□ -1.97
TY4B-JP47024 VPS27YNR006W 1869 nt2.71□□□□□ -1.98
TY4B-JP47024 CNM67YNL225C 1746 nt2.71□□□□□ -1.98
TY4B-JP47024 POL30YBR088C 777 nt2.71□□□□□ -1.98
TY4B-JP47024 HSH155YMR288W 2916 nt2.71□□□□□ -1.98
TY4B-JP47024 BNR1YIL159W 4128 nt2.71□□□□□ -1.98
TY4B-JP47024 FLO11YIR019C 4104 nt2.71□□□□□ -1.98
TY4B-JP47024 RPL27AYHR010W 411 nt2.7□□□□□ -1.98
TY4B-JP47024 REV7YIL139C 738 nt2.7□□□□□ -1.98
TY4B-JP47024 YJR098CYJR098C 1971 nt2.7□□□□□ -1.98
TY4B-JP47024 TCP1YDR212W 1680 nt2.69□□□□□ -1.98
TY4B-JP47024 KIN82YCR091W 2163 nt2.69□□□□□ -1.98
TY4B-JP47024 SAT4YCR008W 1812 nt2.69□□□□□ -1.98
TY4B-JP47024 APL4YPR029C 2499 nt2.69□□□□□ -1.98
TY4B-JP47024 SUC2YIL162W 1599 nt2.69□□□□□ -1.98
TY4B-JP47024 DBP7YKR024C 2229 nt2.69□□□□□ -1.98
TY4B-JP47024 HRD1YOL013C 1656 nt2.69□□□□□ -1.98
TY4B-JP47024 YDR431WYDR431W 312 nt2.68□□□□□ -1.98
TY4B-JP47024 RFC5YBR087W 1065 nt2.68□□□□□ -1.98
TY4B-JP47024 IRC8YJL051W 2469 nt2.68□□□□□ -1.98
TY4B-JP47024 ISC10YER180C 804 nt2.68□□□□□ -1.98
TY4B-JP47024 YLR365WYLR365W 333 nt2.68□□□□□ -1.98
TY4B-JP47024 YNL165WYNL165W 1221 nt2.68□□□□□ -1.98
TY4B-JP47024 RPL25YOL127W 429 nt2.68□□□□□ -1.98
TY4B-JP47024 SCP1YOR367W 603 nt2.68□□□□□ -1.98
TY4B-JP47024 LDB17YDL146W 1476 nt2.68□□□□□ -1.98
TY4B-JP47024 ERB1YMR049C 2424 nt2.67□□□□□ -1.98
TY4B-JP47024 NDT80YHR124W 1884 nt2.67□□□□□ -1.98
TY4B-JP47024 YLR363W-AYLR363W-A 258 nt2.67□□□□□ -1.98
TY4B-JP47024 MRM1YOR201C 1239 nt2.67□□□□□ -1.98
TY4B-JP47024 CCH1YGR217W 6120 nt2.67□□□□□ -1.98
TY4B-JP47024 REV3YPL167C 4515 nt2.66□□□□□ -1.98
TY4B-JP47024 PST1YDR055W 1335 nt2.66□□□□□ -1.98
TY4B-JP47024 DIS3YOL021C 3006 nt2.66□□□□□ -1.98
TY4B-JP47024 ECI1YLR284C 843 nt2.66□□□□□ -1.98
TY4B-JP47024 FYV12YOR183W 390 nt2.66□□□□□ -1.98
TY4B-JP47024 IXR1YKL032C 1794 nt2.66□□□□□ -1.98
TY4B-JP47024 KRE33YNL132W 3171 nt2.66□□□□□ -1.98
TY4B-JP47024 UBP6YFR010W 1500 nt2.66□□□□□ -1.98
TY4B-JP47024 YGR126WYGR126W 693 nt2.65□□□□□ -1.98
TY4B-JP47024 YHR086W-AYHR086W-A 162 nt2.65□□□□□ -1.98
TY4B-JP47024 RCE1YMR274C 948 nt2.65□□□□□ -1.98
TY4B-JP47024 SSN2YDR443C 4263 nt2.65□□□□□ -1.99
TY4B-JP47024 PRP8YHR165C 7242 nt2.65□□□□□ -1.99
TY4B-JP47024 SPR28YDR218C 1272 nt2.65□□□□□ -1.99
TY4B-JP47024 YDR249CYDR249C 1122 nt2.65□□□□□ -1.99
TY4B-JP47024 SLD7YOR060C 774 nt2.65□□□□□ -1.99
TY4B-JP47024 YOR292CYOR292C 930 nt2.65□□□□□ -1.99
TY4B-JP47024 TDA3YHR009C 1572 nt2.65□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms