RNA–Protein interactions for RNA: YOR060C

SLD7, Transcript of Protein with a role in chromosomal DNA replication, yeastyeast

Gene SLD7, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD7YOR060C DRS1P32892 752 aaKnown RBP16.34■□□□□ 0.21
SLD7YOR060C MTC1P47018 478 aaKnown RBP15.54■□□□□ 0.08
SLD7YOR060C BFR2Q06631 534 aaKnown RBP14.5□□□□□ -0.09
SLD7YOR060C TFA1P36100 482 aa14.22□□□□□ -0.13
SLD7YOR060C FAP1P53971 965 aa14.19□□□□□ -0.14
SLD7YOR060C AVT3P36062 692 aa13.71□□□□□ -0.21
SLD7YOR060C DIP2Q12220 943 aaPredicted RBP13.65□□□□□ -0.22
SLD7YOR060C PRY3P47033 881 aa13.34□□□□□ -0.27
SLD7YOR060C PRI1P10363 409 aa13.2□□□□□ -0.3
SLD7YOR060C AAD16Q02895 342 aa13.14□□□□□ -0.31
SLD7YOR060C ISW2Q08773 1120 aa12.91□□□□□ -0.34
SLD7YOR060C RQC2Q12532 1038 aaKnown RBP12.86□□□□□ -0.35
SLD7YOR060C RPG1P38249 964 aaKnown RBP12.79□□□□□ -0.36
SLD7YOR060C RSE1Q04693 1361 aaKnown RBP12.67□□□□□ -0.38
SLD7YOR060C YCK3P39962 524 aa12.62□□□□□ -0.39
SLD7YOR060C HAA1Q12753 694 aaKnown RBP12.49□□□□□ -0.41
SLD7YOR060C TSR3Q12094 313 aaKnown RBP12.47□□□□□ -0.41
SLD7YOR060C RPL17AP05740 184 aaKnown RBP12.14□□□□□ -0.47
SLD7YOR060C RPL17BP46990 184 aaKnown RBP12.14□□□□□ -0.47
SLD7YOR060C DMA1P38823 416 aa12□□□□□ -0.49
SLD7YOR060C MRPL32P25348 183 aa11.98□□□□□ -0.49
SLD7YOR060C REB1P21538 810 aa11.89□□□□□ -0.51
SLD7YOR060C PTP3P40048 928 aa11.86□□□□□ -0.51
SLD7YOR060C SPT21P35209 758 aa11.79□□□□□ -0.52
SLD7YOR060C RIM101P33400 625 aa11.78□□□□□ -0.52
SLD7YOR060C SSP1P38871 571 aa11.59□□□□□ -0.55
SLD7YOR060C TAF7Q05021 590 aa11.59□□□□□ -0.55
SLD7YOR060C YGL015CP33199 130 aa11.52□□□□□ -0.57
SLD7YOR060C OXP1P28273 1286 aa11.45□□□□□ -0.58
SLD7YOR060C CDC27P38042 758 aa11.36□□□□□ -0.59
SLD7YOR060C YAH1Q12184 172 aaKnown RBP11.36□□□□□ -0.59
SLD7YOR060C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.35□□□□□ -0.59not detected
SLD7YOR060C LEO1P38439 464 aa11.34□□□□□ -0.59
SLD7YOR060C YKR023WP36119 530 aaKnown RBP11.29□□□□□ -0.6
SLD7YOR060C YLR271WQ06152 274 aa11.27□□□□□ -0.61
SLD7YOR060C YIL055CP40523 627 aaKnown RBP11.24□□□□□ -0.61
SLD7YOR060C SAS10Q12136 610 aaPredicted RBP11.14□□□□□ -0.63
SLD7YOR060C MGA2P40578 1113 aa11.12□□□□□ -0.63
SLD7YOR060C RSM7P47150 247 aa11.09□□□□□ -0.63
SLD7YOR060C LEU3P08638 886 aa11.06□□□□□ -0.64
SLD7YOR060C HOP09932 586 aa11.06□□□□□ -0.64
SLD7YOR060C TFC8Q12308 588 aa11.05□□□□□ -0.64
SLD7YOR060C UBP10P53874 792 aaPredicted RBP11.04□□□□□ -0.64
SLD7YOR060C DCD1P06773 312 aa11.03□□□□□ -0.64
SLD7YOR060C MAP2P38174 421 aaKnown RBP11.03□□□□□ -0.64
SLD7YOR060C CST9Q06032 482 aa10.96□□□□□ -0.65
SLD7YOR060C PSD2P53037 1138 aaKnown RBP10.9□□□□□ -0.66
SLD7YOR060C AI2P03876 854 aa10.84□□□□□ -0.67
SLD7YOR060C SCY1P53009 804 aa10.77□□□□□ -0.69
SLD7YOR060C BBC1P47068 1157 aa10.7□□□□□ -0.7
SLD7YOR060C BCH2P36122 765 aa10.69□□□□□ -0.7
SLD7YOR060C RAM2P29703 316 aa10.68□□□□□ -0.7
SLD7YOR060C RPN1P38764 993 aaKnown RBP10.67□□□□□ -0.7
SLD7YOR060C BUD31P25337 157 aaPredicted RBP10.65□□□□□ -0.7
SLD7YOR060C SLX5P32828 619 aaKnown RBP10.63□□□□□ -0.71
SLD7YOR060C SET1P38827 1080 aaKnown RBP10.62□□□□□ -0.71
SLD7YOR060C YPR148CQ06523 435 aa10.59□□□□□ -0.71
SLD7YOR060C TIF4632P39936 914 aaKnown RBP10.58□□□□□ -0.72
SLD7YOR060C EPS1P40557 701 aa10.57□□□□□ -0.72
SLD7YOR060C CKB1P43639 278 aa10.57□□□□□ -0.72
SLD7YOR060C MRM1P25270 412 aa10.55□□□□□ -0.72
SLD7YOR060C SPB4P25808 606 aaPredicted RBP10.55□□□□□ -0.72
SLD7YOR060C DMA2P53924 522 aa10.55□□□□□ -0.72
SLD7YOR060C TGL3P40308 642 aa10.54□□□□□ -0.72
SLD7YOR060C VPS70P47161 811 aa10.54□□□□□ -0.72
SLD7YOR060C RCR1P38212 213 aa10.52□□□□□ -0.73
SLD7YOR060C IFH1P39520 1085 aa10.51□□□□□ -0.73
SLD7YOR060C BDF1P35817 686 aa10.46□□□□□ -0.73
SLD7YOR060C RTG3P38165 486 aa10.45□□□□□ -0.74
SLD7YOR060C MAK11P20484 414 aaKnown RBP10.43□□□□□ -0.74
SLD7YOR060C DSF2P38213 736 aa10.37□□□□□ -0.75
SLD7YOR060C PBS2P08018 668 aa10.32□□□□□ -0.76
SLD7YOR060C COQ8P27697 501 aa10.29□□□□□ -0.76
SLD7YOR060C VPS29P38759 282 aa10.29□□□□□ -0.76
SLD7YOR060C ABP1P15891 592 aaKnown RBP10.28□□□□□ -0.76
SLD7YOR060C UBP9P39967 754 aa10.27□□□□□ -0.77
SLD7YOR060C RLF2Q12495 606 aa10.27□□□□□ -0.77
SLD7YOR060C YNR021WP53723 404 aaKnown RBP10.26□□□□□ -0.77
SLD7YOR060C NOP53Q12080 455 aaKnown RBP10.24□□□□□ -0.77
SLD7YOR060C KIN1P13185 1064 aa10.22□□□□□ -0.77
SLD7YOR060C MAM3Q12296 706 aa10.18□□□□□ -0.78
SLD7YOR060C REF2P42073 533 aaPredicted RBP10.16□□□□□ -0.78
SLD7YOR060C YMR1P47147 688 aaKnown RBP RIP-Chip data10.16□□□□□ -0.78not detected
SLD7YOR060C GLC3P32775 704 aa10.15□□□□□ -0.78
SLD7YOR060C EDS1P38073 919 aa10.14□□□□□ -0.79
SLD7YOR060C AIM7Q12156 149 aa10.14□□□□□ -0.79
SLD7YOR060C SIS1P25294 352 aaKnown RBP10.13□□□□□ -0.79
SLD7YOR060C MIF2P35201 549 aa10.13□□□□□ -0.79
SLD7YOR060C IES2P40154 320 aa10.13□□□□□ -0.79
SLD7YOR060C STS1P38637 319 aa10.12□□□□□ -0.79
SLD7YOR060C NUP42P49686 430 aaKnown RBP10.1□□□□□ -0.79
SLD7YOR060C MST1P07236 462 aa10.08□□□□□ -0.8
SLD7YOR060C DIT2P21595 489 aa10.08□□□□□ -0.8
SLD7YOR060C DBP1P24784 617 aaKnown RBP10.05□□□□□ -0.8
SLD7YOR060C YFR006WP43590 535 aa10.05□□□□□ -0.8
SLD7YOR060C HGH1P48362 394 aaKnown RBP10.05□□□□□ -0.8
SLD7YOR060C YOR238WQ08634 303 aa10.05□□□□□ -0.8
SLD7YOR060C MAK21Q12176 1025 aaKnown RBP10.05□□□□□ -0.8
SLD7YOR060C COX6P00427 148 aa10.02□□□□□ -0.81
SLD7YOR060C NSR1P27476 414 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms