RNA–Protein interactions for RNA: YLR264W

RPS28B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS28B, Length 204 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS28B	YLR264W	RQC2	Q12532	1038 aa	Known RBP	5.55	□□□□□ -1.52
RPS28B	YLR264W	TAF7	Q05021	590 aa		5.24	□□□□□ -1.57
RPS28B	YLR264W	BFR2	Q06631	534 aa	Known RBP	5.23	□□□□□ -1.57
RPS28B	YLR264W	DRS1	P32892	752 aa	Known RBP	5.03	□□□□□ -1.6
RPS28B	YLR264W	TFA1	P36100	482 aa		5.02	□□□□□ -1.61
RPS28B	YLR264W	URN1	Q06525	465 aa	Known RBP	4.95	□□□□□ -1.62
RPS28B	YLR264W	FAP1	P53971	965 aa		4.7	□□□□□ -1.66
RPS28B	YLR264W	SIS2	P36024	562 aa		4.63	□□□□□ -1.67
RPS28B	YLR264W	LEO1	P38439	464 aa		4.56	□□□□□ -1.68
RPS28B	YLR264W	YRB30	P53107	440 aa	Predicted RBP	4.56	□□□□□ -1.68
RPS28B	YLR264W	EBP2	P36049	427 aa	Known RBP	4.55	□□□□□ -1.68
RPS28B	YLR264W	MTC1	P47018	478 aa	Known RBP	4.55	□□□□□ -1.68
RPS28B	YLR264W	NAP1	P25293	417 aa	Known RBP	4.54	□□□□□ -1.68
RPS28B	YLR264W	IOC4	Q04213	475 aa		4.54	□□□□□ -1.68
RPS28B	YLR264W	DMA1	P38823	416 aa		4.52	□□□□□ -1.69
RPS28B	YLR264W	YFR016C	P43597	1233 aa	Known RBP	4.52	□□□□□ -1.69
RPS28B	YLR264W	CAB3	P36076	571 aa		4.49	□□□□□ -1.69
RPS28B	YLR264W	AIM44	Q99299	758 aa		4.48	□□□□□ -1.69
RPS28B	YLR264W	RPS0B	P46654	252 aa	Known RBP	4.43	□□□□□ -1.7
RPS28B	YLR264W	DIP2	Q12220	943 aa	Predicted RBP	4.43	□□□□□ -1.7
RPS28B	YLR264W	PRY3	P47033	881 aa		4.42	□□□□□ -1.7
RPS28B	YLR264W	KRI1	P42846	591 aa	Known RBP	4.41	□□□□□ -1.7
RPS28B	YLR264W	AVT3	P36062	692 aa		4.38	□□□□□ -1.71
RPS28B	YLR264W	NOP2	P40991	618 aa	Known RBP	4.35	□□□□□ -1.71
RPS28B	YLR264W	SNU71	P53207	620 aa	Known RBP	4.34	□□□□□ -1.71
RPS28B	YLR264W	MNN4	P36044	1178 aa		4.33	□□□□□ -1.72
RPS28B	YLR264W	IFH1	P39520	1085 aa		4.33	□□□□□ -1.72
RPS28B	YLR264W	TOP1	P04786	769 aa		4.31	□□□□□ -1.72
RPS28B	YLR264W	ORC1	P54784	914 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS28B	YLR264W	CWC22	P53333	577 aa	Known RBP	4.24	□□□□□ -1.73
RPS28B	YLR264W	MDG1	P53885	366 aa		4.23	□□□□□ -1.73
RPS28B	YLR264W	DEF1	P35732	738 aa	Known RBP	4.19	□□□□□ -1.74
RPS28B	YLR264W	DMA2	P53924	522 aa		4.19	□□□□□ -1.74
RPS28B	YLR264W	BRL1	P38770	471 aa		4.18	□□□□□ -1.74
RPS28B	YLR264W	AAD16	Q02895	342 aa		4.18	□□□□□ -1.74
RPS28B	YLR264W	GIN4	Q12263	1142 aa		4.15	□□□□□ -1.75
RPS28B	YLR264W	HAA1	Q12753	694 aa	Known RBP	4.15	□□□□□ -1.75
RPS28B	YLR264W	PSH1	Q12161	406 aa		4.14	□□□□□ -1.75
RPS28B	YLR264W	PRI1	P10363	409 aa		4.13	□□□□□ -1.75
RPS28B	YLR264W	RLP24	Q07915	199 aa	Known RBP	4.13	□□□□□ -1.75
RPS28B	YLR264W	HIF1	Q12373	385 aa		4.13	□□□□□ -1.75
RPS28B	YLR264W	LEU3	P08638	886 aa		4.12	□□□□□ -1.75
RPS28B	YLR264W	ABP1	P15891	592 aa	Known RBP	4.12	□□□□□ -1.75
RPS28B	YLR264W	ENV11	P53246	860 aa		4.12	□□□□□ -1.75
RPS28B	YLR264W	VPS72	Q03388	795 aa		4.12	□□□□□ -1.75
RPS28B	YLR264W	RLF2	Q12495	606 aa		4.12	□□□□□ -1.75
RPS28B	YLR264W	SWE1	P32944	819 aa		4.11	□□□□□ -1.75
RPS28B	YLR264W	NUG1	P40010	520 aa	Known RBP	4.11	□□□□□ -1.75
RPS28B	YLR264W	SUB1	P54000	292 aa	Known RBP	4.11	□□□□□ -1.75
RPS28B	YLR264W	YPR148C	Q06523	435 aa		4.11	□□□□□ -1.75
RPS28B	YLR264W	PLP2	Q12017	286 aa		4.11	□□□□□ -1.75
RPS28B	YLR264W	TOA1	P32773	286 aa		4.1	□□□□□ -1.75
RPS28B	YLR264W	RPN1	P38764	993 aa	Known RBP	4.1	□□□□□ -1.75
RPS28B	YLR264W	YCK3	P39962	524 aa		4.09	□□□□□ -1.75
RPS28B	YLR264W	TIF4632	P39936	914 aa	Known RBP	4.08	□□□□□ -1.76
RPS28B	YLR264W	NHA1	Q99271	985 aa		4.08	□□□□□ -1.76
RPS28B	YLR264W	HSP82	P02829	709 aa	Known RBP	4.07	□□□□□ -1.76
RPS28B	YLR264W	SPT16	P32558	1035 aa	Known RBP	4.07	□□□□□ -1.76
RPS28B	YLR264W	RPS0A	P32905	252 aa	Known RBP	4.07	□□□□□ -1.76
RPS28B	YLR264W	FPR3	P38911	411 aa	Known RBP	4.07	□□□□□ -1.76
RPS28B	YLR264W	NOP53	Q12080	455 aa	Known RBP	4.07	□□□□□ -1.76
RPS28B	YLR264W	TLG1	Q03322	224 aa		4.06	□□□□□ -1.76
RPS28B	YLR264W	ASF1	P32447	279 aa		4.05	□□□□□ -1.76
RPS28B	YLR264W	BRN1	P38170	754 aa		4.05	□□□□□ -1.76
RPS28B	YLR264W	TPO2	P53283	614 aa		4.05	□□□□□ -1.76
RPS28B	YLR264W	RTS3	P53289	263 aa		4.05	□□□□□ -1.76
RPS28B	YLR264W	SPT2	P06843	333 aa	Predicted RBP	4.04	□□□□□ -1.76
RPS28B	YLR264W	ATG36	P46983	293 aa		4.04	□□□□□ -1.76
RPS28B	YLR264W	SAS10	Q12136	610 aa	Predicted RBP	4.04	□□□□□ -1.76
RPS28B	YLR264W	SSA1	P10591	642 aa	Known RBP	4.03	□□□□□ -1.76
RPS28B	YLR264W	SSA2	P10592	639 aa	Known RBP	4.03	□□□□□ -1.76
RPS28B	YLR264W	ENP1	P38333	483 aa	Known RBP	4.03	□□□□□ -1.76
RPS28B	YLR264W	MPP10	P47083	593 aa	Known RBP	4.03	□□□□□ -1.76
RPS28B	YLR264W	TCB2	P48231	1178 aa		4.03	□□□□□ -1.76
RPS28B	YLR264W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
RPS28B	YLR264W	RSE1	Q04693	1361 aa	Known RBP	4.02	□□□□□ -1.77
RPS28B	YLR264W	SPT7	P35177	1332 aa		4.01	□□□□□ -1.77
RPS28B	YLR264W	YML020W	Q03722	664 aa		4.01	□□□□□ -1.77
RPS28B	YLR264W	LAM6	Q08001	693 aa		4.01	□□□□□ -1.77
RPS28B	YLR264W	OSW7	P43611	510 aa		4	□□□□□ -1.77
RPS28B	YLR264W	BUD21	Q08492	214 aa	Predicted RBP	4	□□□□□ -1.77
RPS28B	YLR264W	YJR008W	P47085	338 aa		3.99	□□□□□ -1.77
RPS28B	YLR264W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
RPS28B	YLR264W	KIP3	P53086	805 aa	Known RBP	3.99	□□□□□ -1.77
RPS28B	YLR264W	ISW1	P38144	1129 aa		3.98	□□□□□ -1.77
RPS28B	YLR264W	NOP7	P53261	605 aa	Known RBP	3.98	□□□□□ -1.77
RPS28B	YLR264W	YMR196W	Q04336	1088 aa		3.97	□□□□□ -1.77
RPS28B	YLR264W	SSP1	P38871	571 aa		3.96	□□□□□ -1.78
RPS28B	YLR264W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
RPS28B	YLR264W	RPT2	P40327	437 aa	Known RBP	3.96	□□□□□ -1.78
RPS28B	YLR264W	AIM21	P40563	679 aa		3.96	□□□□□ -1.78
RPS28B	YLR264W	GEF1	P37020	779 aa		3.95	□□□□□ -1.78
RPS28B	YLR264W	ZDS1	P50111	915 aa	Known RBP	3.95	□□□□□ -1.78
RPS28B	YLR264W	PIL1	P53252	339 aa	Known RBP	3.95	□□□□□ -1.78
RPS28B	YLR264W	RNA1	P11745	407 aa	Known RBP	3.94	□□□□□ -1.78
RPS28B	YLR264W	PDR1	P12383	1068 aa		3.94	□□□□□ -1.78
RPS28B	YLR264W	DAL5	P15365	543 aa		3.94	□□□□□ -1.78
RPS28B	YLR264W	TY4A-J	P47023	414 aa		3.94	□□□□□ -1.78
RPS28B	YLR264W	FAR11	P53917	953 aa		3.94	□□□□□ -1.78
RPS28B	YLR264W	GRX3	Q03835	250 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms