Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1CP16403 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
HIST1H1CP16403 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1CP16403 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1CP16403 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1CP16403 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1CP16403 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1CP16403 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1CP16403 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1CP16403 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1CP16403 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1CP16403 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.12■□□□□ 0.65
HIST1H1CP16403 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1CP16403 AP004607.7-201ENST00000527152 1677 ntBASIC19.12■□□□□ 0.65
HIST1H1CP16403 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HIST1H1CP16403 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.12■□□□□ 0.65
HIST1H1CP16403 AL034346.1-201ENST00000568244 1277 ntBASIC19.12■□□□□ 0.65
HIST1H1CP16403 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.12■□□□□ 0.65
HIST1H1CP16403 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1CP16403 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1CP16403 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1CP16403 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.11■□□□□ 0.65
HIST1H1CP16403 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1CP16403 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1CP16403 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1CP16403 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1CP16403 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1CP16403 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HIST1H1CP16403 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1CP16403 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1CP16403 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HIST1H1CP16403 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1CP16403 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1CP16403 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1CP16403 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H1CP16403 AC003102.1-202ENST00000563394 1796 ntBASIC19.09■□□□□ 0.65
HIST1H1CP16403 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1CP16403 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H1CP16403 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HIST1H1CP16403 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1CP16403 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
HIST1H1CP16403 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HIST1H1CP16403 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1CP16403 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H1CP16403 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.08■□□□□ 0.64
HIST1H1CP16403 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H1CP16403 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H1CP16403 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.08■□□□□ 0.64
HIST1H1CP16403 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H1CP16403 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST1H1CP16403 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HIST1H1CP16403 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms