Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SMIM18P0DKX4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 AC112907.3-201ENST00000577781 2400 ntBASIC19.55■□□□□ 0.72
SMIM18P0DKX4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 C17orf82-201ENST00000623772 1530 ntBASIC19.55■□□□□ 0.72
SMIM18P0DKX4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM18P0DKX4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 RPS2P7-201ENST00000447334 885 ntBASIC19.54■□□□□ 0.72
SMIM18P0DKX4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SMIM18P0DKX4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SMIM18P0DKX4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 ECEL1P2-201ENST00000461596 1295 ntBASIC19.52■□□□□ 0.72
SMIM18P0DKX4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.52■□□□□ 0.72
SMIM18P0DKX4 AC027702.1-201ENST00000563810 1770 ntBASIC19.52■□□□□ 0.71
SMIM18P0DKX4 AC116562.4-201ENST00000641316 2276 ntBASIC19.51■□□□□ 0.71
SMIM18P0DKX4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 AC104564.3-201ENST00000582367 638 ntBASIC19.51■□□□□ 0.71
SMIM18P0DKX4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SMIM18P0DKX4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 AC006128.1-201ENST00000624704 1661 ntBASIC19.5■□□□□ 0.71
SMIM18P0DKX4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 AC007029.1-201ENST00000604183 313 ntBASIC19.5■□□□□ 0.71
SMIM18P0DKX4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 TNXA-203ENST00000507684 2038 ntBASIC19.5■□□□□ 0.71
SMIM18P0DKX4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.5■□□□□ 0.71
SMIM18P0DKX4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM18P0DKX4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM18P0DKX4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms