Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.11■□□□□ 0.65
MRPL3P09001 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.11■□□□□ 0.65
MRPL3P09001 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.11■□□□□ 0.65
MRPL3P09001 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MRPL3P09001 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.11■□□□□ 0.65
MRPL3P09001 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MRPL3P09001 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MRPL3P09001 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MRPL3P09001 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
MRPL3P09001 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MRPL3P09001 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
MRPL3P09001 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
MRPL3P09001 KRT16P3-201ENST00000439127 1283 ntBASIC19.1■□□□□ 0.65
MRPL3P09001 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.1■□□□□ 0.65
MRPL3P09001 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MRPL3P09001 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.1■□□□□ 0.65
MRPL3P09001 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.1■□□□□ 0.65
MRPL3P09001 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.1■□□□□ 0.65
MRPL3P09001 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.1■□□□□ 0.65
MRPL3P09001 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MRPL3P09001 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.1■□□□□ 0.65
MRPL3P09001 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 AL157384.1-201ENST00000445995 2473 ntBASIC19.1■□□□□ 0.65
MRPL3P09001 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL3P09001 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.09■□□□□ 0.65
MRPL3P09001 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL3P09001 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL3P09001 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
MRPL3P09001 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MRPL3P09001 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL3P09001 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL3P09001 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.09■□□□□ 0.65
MRPL3P09001 AC104564.3-201ENST00000582367 638 ntBASIC19.09■□□□□ 0.65
MRPL3P09001 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.09■□□□□ 0.65
MRPL3P09001 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.09■□□□□ 0.65
MRPL3P09001 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.09■□□□□ 0.65
MRPL3P09001 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MRPL3P09001 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MRPL3P09001 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MRPL3P09001 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MRPL3P09001 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
MRPL3P09001 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MRPL3P09001 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.08■□□□□ 0.65
MRPL3P09001 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MRPL3P09001 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL3P09001 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL3P09001 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL3P09001 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.08■□□□□ 0.64
MRPL3P09001 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.08■□□□□ 0.64
MRPL3P09001 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MRPL3P09001 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPL3P09001 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPL3P09001 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.07■□□□□ 0.64
MRPL3P09001 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
MRPL3P09001 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.07■□□□□ 0.64
MRPL3P09001 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.07■□□□□ 0.64
MRPL3P09001 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.07■□□□□ 0.64
MRPL3P09001 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.07■□□□□ 0.64
MRPL3P09001 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MRPL3P09001 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.07■□□□□ 0.64
MRPL3P09001 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MRPL3P09001 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.07■□□□□ 0.64
MRPL3P09001 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MRPL3P09001 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL3P09001 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL3P09001 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
MRPL3P09001 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL3P09001 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
MRPL3P09001 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.06■□□□□ 0.64
MRPL3P09001 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL3P09001 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL3P09001 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL3P09001 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.06■□□□□ 0.64
MRPL3P09001 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.06■□□□□ 0.64
MRPL3P09001 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MRPL3P09001 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.06■□□□□ 0.64
MRPL3P09001 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL3P09001 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MRPL3P09001 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
MRPL3P09001 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL3P09001 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPL3P09001 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms