Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC1P07992 TSPY26P-201ENST00000476365 1326 ntBASIC18.83■□□□□ 0.61
ERCC1P07992 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC1P07992 AC004687.1-201ENST00000579003 1625 ntBASIC18.83■□□□□ 0.61
ERCC1P07992 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC1P07992 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.83■□□□□ 0.6
ERCC1P07992 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ERCC1P07992 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ERCC1P07992 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ERCC1P07992 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC1P07992 IGHV3-19-201ENST00000521488 291 ntBASIC18.83■□□□□ 0.6
ERCC1P07992 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.83■□□□□ 0.6
ERCC1P07992 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC1P07992 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC1P07992 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC1P07992 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC1P07992 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC1P07992 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC1P07992 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC1P07992 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ERCC1P07992 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC1P07992 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC1P07992 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC1P07992 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC1P07992 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC1P07992 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC1P07992 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ERCC1P07992 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC1P07992 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ERCC1P07992 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
ERCC1P07992 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC1P07992 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC1P07992 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC1P07992 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC1P07992 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC1P07992 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.82■□□□□ 0.6
ERCC1P07992 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC1P07992 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.82■□□□□ 0.6
ERCC1P07992 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC1P07992 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ERCC1P07992 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC1P07992 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC1P07992 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC1P07992 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC1P07992 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC1P07992 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ERCC1P07992 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ERCC1P07992 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ERCC1P07992 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC1P07992 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ERCC1P07992 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC1P07992 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC1P07992 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC1P07992 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC1P07992 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC1P07992 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC1P07992 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.8■□□□□ 0.6
ERCC1P07992 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERCC1P07992 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC1P07992 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC1P07992 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC1P07992 AC010542.4-201ENST00000563151 1910 ntBASIC18.8■□□□□ 0.6
ERCC1P07992 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC1P07992 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERCC1P07992 AP005435.1-201ENST00000529293 1178 ntBASIC18.79■□□□□ 0.6
ERCC1P07992 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC1P07992 AL358852.1-201ENST00000623174 1268 ntBASIC18.79■□□□□ 0.6
ERCC1P07992 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC1P07992 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC1P07992 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC1P07992 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ERCC1P07992 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC1P07992 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ERCC1P07992 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms