Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LTAP01374 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
LTAP01374 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LTAP01374 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LTAP01374 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.06■□□□□ 0.16
LTAP01374 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LTAP01374 HSD17B1P1-201ENST00000590052 955 ntBASIC16.06■□□□□ 0.16
LTAP01374 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LTAP01374 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LTAP01374 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LTAP01374 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.05■□□□□ 0.16
LTAP01374 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LTAP01374 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LTAP01374 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LTAP01374 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.05■□□□□ 0.16
LTAP01374 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 ABHD17AP5-201ENST00000580133 923 ntBASIC16.05■□□□□ 0.16
LTAP01374 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LTAP01374 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.05■□□□□ 0.16
LTAP01374 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LTAP01374 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
LTAP01374 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
LTAP01374 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
LTAP01374 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LTAP01374 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.04■□□□□ 0.16
LTAP01374 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
LTAP01374 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
LTAP01374 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LTAP01374 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LTAP01374 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.04■□□□□ 0.16
LTAP01374 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LTAP01374 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 AC021242.3-201ENST00000607598 1377 ntBASIC16.03■□□□□ 0.16
LTAP01374 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.03■□□□□ 0.16
LTAP01374 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.03■□□□□ 0.16
LTAP01374 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.03■□□□□ 0.16
LTAP01374 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.03■□□□□ 0.16
LTAP01374 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.03■□□□□ 0.16
LTAP01374 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.03■□□□□ 0.16
LTAP01374 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 GABARAPL3-202ENST00000624044 1851 ntBASIC16.03■□□□□ 0.16
LTAP01374 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.03■□□□□ 0.16
LTAP01374 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LTAP01374 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LTAP01374 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.02■□□□□ 0.16
LTAP01374 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LTAP01374 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.02■□□□□ 0.16
LTAP01374 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LTAP01374 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LTAP01374 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LTAP01374 TSPY13P-201ENST00000338964 914 ntBASIC16.02■□□□□ 0.16
LTAP01374 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
LTAP01374 AC103834.1-201ENST00000520383 144 ntBASIC16.02■□□□□ 0.16
LTAP01374 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.02■□□□□ 0.16
LTAP01374 AC103724.3-201ENST00000564481 992 ntBASIC16.02■□□□□ 0.16
LTAP01374 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LTAP01374 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LTAP01374 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.02■□□□□ 0.15
LTAP01374 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LTAP01374 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LTAP01374 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.02■□□□□ 0.15
LTAP01374 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LTAP01374 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LTAP01374 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms