Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLPXO76031 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.29■□□□□ 0.68
CLPXO76031 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 AC022616.5-201ENST00000518796 181 ntBASIC19.29■□□□□ 0.68
CLPXO76031 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.29■□□□□ 0.68
CLPXO76031 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLPXO76031 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPXO76031 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
CLPXO76031 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLPXO76031 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.28■□□□□ 0.68
CLPXO76031 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 AC009299.2-201ENST00000482477 511 ntBASIC19.28■□□□□ 0.68
CLPXO76031 AC103834.1-201ENST00000520383 144 ntBASIC19.28■□□□□ 0.68
CLPXO76031 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.28■□□□□ 0.68
CLPXO76031 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.28■□□□□ 0.68
CLPXO76031 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.28■□□□□ 0.68
CLPXO76031 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPXO76031 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
CLPXO76031 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.27■□□□□ 0.68
CLPXO76031 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPXO76031 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPXO76031 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPXO76031 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CLPXO76031 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPXO76031 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPXO76031 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.27■□□□□ 0.68
CLPXO76031 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.27■□□□□ 0.68
CLPXO76031 MIR4508-201ENST00000584178 70 ntBASIC19.27■□□□□ 0.68
CLPXO76031 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLPXO76031 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.27■□□□□ 0.68
CLPXO76031 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPXO76031 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLPXO76031 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.27■□□□□ 0.67
CLPXO76031 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLPXO76031 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLPXO76031 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLPXO76031 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.26■□□□□ 0.67
CLPXO76031 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLPXO76031 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CLPXO76031 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPXO76031 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CLPXO76031 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CLPXO76031 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.25■□□□□ 0.67
CLPXO76031 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CLPXO76031 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLPXO76031 PVT1_1.1-201ENST00000615125 194 ntBASIC19.25■□□□□ 0.67
CLPXO76031 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.25■□□□□ 0.67
CLPXO76031 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPXO76031 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CLPXO76031 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.24■□□□□ 0.67
CLPXO76031 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLPXO76031 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLPXO76031 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.24■□□□□ 0.67
CLPXO76031 AC011551.1-201ENST00000614101 683 ntBASIC19.24■□□□□ 0.67
CLPXO76031 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.24■□□□□ 0.67
CLPXO76031 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CLPXO76031 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPXO76031 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPXO76031 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
CLPXO76031 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms