Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDCD6O75340 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDCD6O75340 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.99■□□□□ 0.47
PDCD6O75340 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.98■□□□□ 0.47
PDCD6O75340 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.98■□□□□ 0.47
PDCD6O75340 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDCD6O75340 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.98■□□□□ 0.47
PDCD6O75340 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDCD6O75340 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDCD6O75340 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.98■□□□□ 0.47
PDCD6O75340 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDCD6O75340 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PDCD6O75340 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PDCD6O75340 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.97■□□□□ 0.47
PDCD6O75340 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.97■□□□□ 0.47
PDCD6O75340 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
PDCD6O75340 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.97■□□□□ 0.47
PDCD6O75340 AP005435.1-201ENST00000529293 1178 ntBASIC17.97■□□□□ 0.47
PDCD6O75340 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.97■□□□□ 0.47
PDCD6O75340 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.97■□□□□ 0.47
PDCD6O75340 AC136469.2-201ENST00000623944 1028 ntBASIC17.97■□□□□ 0.47
PDCD6O75340 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PDCD6O75340 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.97■□□□□ 0.47
PDCD6O75340 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDCD6O75340 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDCD6O75340 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDCD6O75340 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.96■□□□□ 0.47
PDCD6O75340 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDCD6O75340 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDCD6O75340 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PDCD6O75340 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.96■□□□□ 0.47
PDCD6O75340 AL356441.2-201ENST00000443009 864 ntBASIC17.96■□□□□ 0.47
PDCD6O75340 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.96■□□□□ 0.47
PDCD6O75340 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.96■□□□□ 0.47
PDCD6O75340 AC011298.3-201ENST00000615796 283 ntBASIC17.96■□□□□ 0.47
PDCD6O75340 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDCD6O75340 AP004607.7-201ENST00000527152 1677 ntBASIC17.96■□□□□ 0.47
PDCD6O75340 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.96■□□□□ 0.47
PDCD6O75340 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PDCD6O75340 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
PDCD6O75340 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PDCD6O75340 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDCD6O75340 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.95■□□□□ 0.46
PDCD6O75340 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.95■□□□□ 0.46
PDCD6O75340 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDCD6O75340 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDCD6O75340 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.95■□□□□ 0.46
PDCD6O75340 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.95■□□□□ 0.46
PDCD6O75340 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PDCD6O75340 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDCD6O75340 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PDCD6O75340 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
PDCD6O75340 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.94■□□□□ 0.46
PDCD6O75340 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.94■□□□□ 0.46
PDCD6O75340 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.94■□□□□ 0.46
PDCD6O75340 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDCD6O75340 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.93■□□□□ 0.46
PDCD6O75340 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms