Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV13-2A0A0B4J235 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 TPT1-202ENST00000379055 948 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-2A0A0B4J235 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 ZNRF2P2-203ENST00000454624 420 ntBASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 AC104564.3-201ENST00000582367 638 ntBASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 AC018755.3-202ENST00000596210 929 ntBASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-2A0A0B4J235 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 MIR3648-2-201ENST00000581792 180 ntBASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 MIR3648-1-201ENST00000615959 180 ntBASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV13-2A0A0B4J235 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 LINC01529-204ENST00000636474 1715 ntBASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV13-2A0A0B4J235 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms