Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 SLC4A11-201ENST00000380056 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 MINDY1-203ENST00000361936 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 SLC6A3-201ENST00000270349 3936 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 TRIM64DP-201ENST00000529289 1342 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 PELO-201ENST00000274311 4349 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 ZNF16-201ENST00000276816 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 CATSPER1-201ENST00000312106 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 ZFP1-203ENST00000464850 3067 ntTSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AL049829.3-201ENST00000604456 1875 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 PPARD-203ENST00000360694 3747 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 CST8-201ENST00000246012 890 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 CLDN17-201ENST00000286808 1193 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 RN7SKP9-201ENST00000364923 299 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GAGE1-201ENST00000381700 768 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GAGE12H-201ENST00000381722 527 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GAGE12D-201ENST00000405679 527 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GAGE12C-201ENST00000420398 527 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AL158201.1-201ENST00000426382 1248 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 BANF1P2-201ENST00000430526 264 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 ATF4P3-201ENST00000433309 1056 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 SLC25A5P5-201ENST00000435239 897 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GAGE12F-201ENST00000440137 527 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 LINC00158-203ENST00000440205 740 ntTSL 3 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GAGE12G-201ENST00000445148 527 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 BRD9P2-201ENST00000506203 239 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 RNA5SP520-201ENST00000516506 113 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 RNA5SP523-201ENST00000516858 113 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AC051619.1-201ENST00000560007 616 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AP000897.2-202ENST00000579332 821 ntTSL 3 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 RN7SL336P-201ENST00000580171 297 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AC012498.2-201ENST00000604586 372 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AP000345.2-201ENST00000608615 1081 ntTSL 3 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GGNBP1-203ENST00000612409 592 ntTSL 5 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 GAGE13-201ENST00000612958 530 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AL121845.4-201ENST00000613401 306 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 CU633906.3-201ENST00000623377 741 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 NFE4-202ENST00000638942 962 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 DPP3P1-201ENST00000508984 2063 ntBASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 AP002409.1-201ENST00000584722 2295 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 LINC01016-201ENST00000506222 3151 ntTSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 CDRT1-202ENST00000354433 1557 ntTSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 EXD2-204ENST00000409242 2496 ntTSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 FAM47A-201ENST00000346193 2556 ntAPPRIS P2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 ALKBH8-204ENST00000417449 2114 ntAPPRIS ALT1 TSL 2 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 CDK13-206ENST00000611390 2222 ntTSL 5 BASIC10.6□□□□□ -0.71
NPIPA3F8WFD2 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ITGBL1-205ENST00000545560 4808 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 GPRASP2-204ENST00000535209 3847 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC114760.2-201ENST00000606818 2065 ntTSL 4 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 PLSCR4-202ENST00000383083 3033 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 CLASP2-209ENST00000468888 6978 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 EXT2-201ENST00000343631 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 NME6-207ENST00000426689 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 NDUFA2-204ENST00000512088 627 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC098976.2-201ENST00000514144 881 ntBASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC026904.4-201ENST00000523038 559 ntTSL 4 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC108482.1-201ENST00000523413 722 ntTSL 5 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 RAD51-AS1-203ENST00000533146 718 ntTSL 3 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 ARL1-209ENST00000551671 879 ntTSL 2 BASIC10.59□□□□□ -0.71
NPIPA3F8WFD2 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms