RNA–Protein interactions for RNA: ENST00000361936.9

MINDY1-203, Transcript of MINDY lysine 48 deubiquitinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MINDY1, Length 2,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY1-203ENST00000361936 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
MINDY1-203ENST00000361936 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
MINDY1-203ENST00000361936 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
MINDY1-203ENST00000361936 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
MINDY1-203ENST00000361936 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
MINDY1-203ENST00000361936 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
MINDY1-203ENST00000361936 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
MINDY1-203ENST00000361936 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
MINDY1-203ENST00000361936 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
MINDY1-203ENST00000361936 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
MINDY1-203ENST00000361936 HRCP23327 699 aa20.07■□□□□ 0.8
MINDY1-203ENST00000361936 ABCC9O60706 1549 aa20.07■□□□□ 0.8
MINDY1-203ENST00000361936 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
MINDY1-203ENST00000361936 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
MINDY1-203ENST00000361936 LOC105371045A0A1W2PR82 267 aa19.84■□□□□ 0.77
MINDY1-203ENST00000361936 NACADO15069 1562 aa19.71■□□□□ 0.75
MINDY1-203ENST00000361936 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
MINDY1-203ENST00000361936 PPARGC1BQ86YN6 1023 aaKnown RBP19.71■□□□□ 0.75
MINDY1-203ENST00000361936 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
MINDY1-203ENST00000361936 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
MINDY1-203ENST00000361936 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
MINDY1-203ENST00000361936 FAM9AQ8IZU1 332 aaPredicted RBP19.47■□□□□ 0.71
MINDY1-203ENST00000361936 WIZO95785 1651 aa19.46■□□□□ 0.71
MINDY1-203ENST00000361936 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
MINDY1-203ENST00000361936 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
MINDY1-203ENST00000361936 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
MINDY1-203ENST00000361936 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
MINDY1-203ENST00000361936 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
MINDY1-203ENST00000361936 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
MINDY1-203ENST00000361936 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
MINDY1-203ENST00000361936 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
MINDY1-203ENST00000361936 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
MINDY1-203ENST00000361936 ZEB1P37275 1124 aaPredicted RBP19.04■□□□□ 0.64
MINDY1-203ENST00000361936 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
MINDY1-203ENST00000361936 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
MINDY1-203ENST00000361936 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
MINDY1-203ENST00000361936 SOGA1O94964 1423 aa18.83■□□□□ 0.6
MINDY1-203ENST00000361936 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
MINDY1-203ENST00000361936 CEP162Q5TB80 1403 aa18.75■□□□□ 0.59
MINDY1-203ENST00000361936 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
MINDY1-203ENST00000361936 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
MINDY1-203ENST00000361936 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.58
MINDY1-203ENST00000361936 CSRNP3Q8WYN3 585 aa18.69■□□□□ 0.58
MINDY1-203ENST00000361936 EEA1Q15075 1411 aa18.68■□□□□ 0.58
MINDY1-203ENST00000361936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
MINDY1-203ENST00000361936 TNIKQ9UKE5 1360 aa18.68■□□□□ 0.58
MINDY1-203ENST00000361936 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
MINDY1-203ENST00000361936 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
MINDY1-203ENST00000361936 ATAD2BQ9ULI0 1458 aa18.62■□□□□ 0.57
MINDY1-203ENST00000361936 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
MINDY1-203ENST00000361936 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
MINDY1-203ENST00000361936 GOLGA3Q08378 1498 aa18.6■□□□□ 0.57
MINDY1-203ENST00000361936 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
MINDY1-203ENST00000361936 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
MINDY1-203ENST00000361936 KIF21BO75037 1637 aa18.47■□□□□ 0.55
MINDY1-203ENST00000361936 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
MINDY1-203ENST00000361936 CLIP1P30622 1438 aa18.39■□□□□ 0.54
MINDY1-203ENST00000361936 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
MINDY1-203ENST00000361936 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
MINDY1-203ENST00000361936 RAPGEF2Q9Y4G8 1499 aa18.38■□□□□ 0.53
MINDY1-203ENST00000361936 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
MINDY1-203ENST00000361936 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
MINDY1-203ENST00000361936 RANGAP1P46060 587 aaPredicted RBP18.35■□□□□ 0.53
MINDY1-203ENST00000361936 VPS8Q8N3P4 1428 aa18.3■□□□□ 0.52
MINDY1-203ENST00000361936 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
MINDY1-203ENST00000361936 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.51
MINDY1-203ENST00000361936 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
MINDY1-203ENST00000361936 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
MINDY1-203ENST00000361936 APLP2Q06481 763 aa18.23■□□□□ 0.51
MINDY1-203ENST00000361936 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
MINDY1-203ENST00000361936 CUX1P39880 1505 aa18.19■□□□□ 0.5
MINDY1-203ENST00000361936 CENPBP07199 599 aaPredicted RBP18.18■□□□□ 0.5
MINDY1-203ENST00000361936 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
MINDY1-203ENST00000361936 PRXQ9BXM0 1461 aa18.16■□□□□ 0.5
MINDY1-203ENST00000361936 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.49
MINDY1-203ENST00000361936 CFTRP13569 1480 aa18.11■□□□□ 0.49
MINDY1-203ENST00000361936 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
MINDY1-203ENST00000361936 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
MINDY1-203ENST00000361936 KANK4Q5T7N3 995 aaPredicted RBP18■□□□□ 0.47
MINDY1-203ENST00000361936 PRDM2Q13029 1718 aa18■□□□□ 0.47
MINDY1-203ENST00000361936 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
MINDY1-203ENST00000361936 MIER1Q8N108 512 aa17.97■□□□□ 0.47
MINDY1-203ENST00000361936 CUX2O14529 1486 aa17.94■□□□□ 0.46
MINDY1-203ENST00000361936 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
MINDY1-203ENST00000361936 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
MINDY1-203ENST00000361936 IGF1RP08069 1367 aa17.87■□□□□ 0.45
MINDY1-203ENST00000361936 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
MINDY1-203ENST00000361936 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
MINDY1-203ENST00000361936 RRBP1Q9P2E9 1410 aaKnown RBP17.86■□□□□ 0.45
MINDY1-203ENST00000361936 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
MINDY1-203ENST00000361936 CARMIL1Q5VZK9 1371 aa17.82■□□□□ 0.44
MINDY1-203ENST00000361936 ITGAEP38570 1179 aa17.8■□□□□ 0.44
MINDY1-203ENST00000361936 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
MINDY1-203ENST00000361936 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
MINDY1-203ENST00000361936 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
MINDY1-203ENST00000361936 TIAM1Q13009 1591 aa17.76■□□□□ 0.43
MINDY1-203ENST00000361936 P3H3Q8IVL6 736 aa17.71■□□□□ 0.42
MINDY1-203ENST00000361936 RAD54L2Q9Y4B4 1467 aa17.7■□□□□ 0.42
MINDY1-203ENST00000361936 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
MINDY1-203ENST00000361936 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms