Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 USP6NL-201ENST00000277575 4512 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 MICU1-211ENST00000635239 2215 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 ARHGEF15-201ENST00000361926 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 GNL3-202ENST00000418458 2040 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 MOB4-202ENST00000323303 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
NPIPA3F8WFD2 PIGO-203ENST00000378617 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 C17orf75-202ENST00000577809 1642 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 SDAD1P1-201ENST00000519902 3174 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 LILRA1-202ENST00000453777 2313 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 TOM1L1-213ENST00000572405 2337 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 ELOVL7-201ENST00000425382 3827 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 RCL1-208ENST00000448872 1459 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 HHAT-208ENST00000545154 3507 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AL078604.2-201ENST00000430078 2002 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 LSINCT5-201ENST00000626215 2647 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 ENPP2-203ENST00000427067 3271 ntTSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 LHFPL3-AS1-206ENST00000449764 1196 ntTSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AL359692.1-201ENST00000451069 265 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC073188.5-201ENST00000451103 673 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 RN7SL674P-201ENST00000463397 275 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC104758.4-201ENST00000565869 353 ntTSL 3 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AL390726.4-201ENST00000566538 469 ntTSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC127496.2-201ENST00000576859 368 ntTSL 3 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC011498.1-201ENST00000591414 478 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC093159.2-201ENST00000603429 636 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC060764.1-201ENST00000603811 454 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC005740.4-201ENST00000607378 957 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 MIR6511B1-201ENST00000612014 85 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC010271.2-201ENST00000614440 588 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC011487.4-201ENST00000616855 525 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 RN7SL1-201ENST00000618786 299 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AP001059.2-201ENST00000620163 449 ntBASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 MECP2-226ENST00000640414 897 ntTSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 KCNMA1-289ENST00000640807 3387 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 NT5E-203ENST00000369651 3918 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 SEMA6A-205ENST00000503865 1678 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 TAF1A-203ENST00000366890 1648 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 ANKRD22-201ENST00000371930 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 TTLL5-202ENST00000298832 4683 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 VPS4A-201ENST00000254950 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
NPIPA3F8WFD2 AP001469.3-202ENST00000430259 2014 ntTSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ZNF180-211ENST00000592529 3048 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 DCLK2-202ENST00000302176 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 STK33-202ENST00000358872 1991 ntTSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 CHIAP2-204ENST00000532686 1449 ntBASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 OPTC-201ENST00000367222 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 MAGEB17-201ENST00000400003 1379 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NPIPA3F8WFD2 KRT34-201ENST00000394001 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms