RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.59
COL11A1-203ENST00000370096 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
COL11A1-203ENST00000370096 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
COL11A1-203ENST00000370096 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.46
COL11A1-203ENST00000370096 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
COL11A1-203ENST00000370096 TTBK1Q5TCY1 1321 aaPredicted RBP17.39■□□□□ 0.37
COL11A1-203ENST00000370096 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
COL11A1-203ENST00000370096 APLP2Q06481 763 aa17.26■□□□□ 0.35
COL11A1-203ENST00000370096 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
COL11A1-203ENST00000370096 MYT1Q01538 1121 aa17.18■□□□□ 0.34
COL11A1-203ENST00000370096 PCGF6Q9BYE7 350 aa17.16■□□□□ 0.34
COL11A1-203ENST00000370096 CENPBP07199 599 aaPredicted RBP17.14■□□□□ 0.33
COL11A1-203ENST00000370096 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
COL11A1-203ENST00000370096 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
COL11A1-203ENST00000370096 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
COL11A1-203ENST00000370096 NEFLP07196 543 aa16.87■□□□□ 0.29
COL11A1-203ENST00000370096 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
COL11A1-203ENST00000370096 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
COL11A1-203ENST00000370096 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
COL11A1-203ENST00000370096 PPARGC1BQ86YN6 1023 aaKnown RBP16.51■□□□□ 0.23
COL11A1-203ENST00000370096 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
COL11A1-203ENST00000370096 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
COL11A1-203ENST00000370096 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
COL11A1-203ENST00000370096 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
COL11A1-203ENST00000370096 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-203ENST00000370096 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-203ENST00000370096 ITGAEP38570 1179 aa16.2■□□□□ 0.18
COL11A1-203ENST00000370096 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
COL11A1-203ENST00000370096 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
COL11A1-203ENST00000370096 HRCP23327 699 aa16.13■□□□□ 0.17
COL11A1-203ENST00000370096 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
COL11A1-203ENST00000370096 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
COL11A1-203ENST00000370096 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
COL11A1-203ENST00000370096 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
COL11A1-203ENST00000370096 BCANQ96GW7 911 aa16■□□□□ 0.15
COL11A1-203ENST00000370096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
COL11A1-203ENST00000370096 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
COL11A1-203ENST00000370096 BCL11AQ9H165 835 aa15.88■□□□□ 0.13
COL11A1-203ENST00000370096 DIEXFQ68CQ4 756 aaKnown RBP15.84■□□□□ 0.13
COL11A1-203ENST00000370096 GTF3C3Q9Y5Q9 886 aa15.77■□□□□ 0.12
COL11A1-203ENST00000370096 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.12
COL11A1-203ENST00000370096 EIF5BO60841 1220 aaKnown RBP15.75■□□□□ 0.11
COL11A1-203ENST00000370096 CDK11AQ9UQ88 783 aaPredicted RBP15.72■□□□□ 0.11
COL11A1-203ENST00000370096 SLC24A1O60721 1099 aa15.66■□□□□ 0.1
COL11A1-203ENST00000370096 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
COL11A1-203ENST00000370096 NEUROD1Q13562 356 aa15.65■□□□□ 0.1
COL11A1-203ENST00000370096 NPM2Q86SE8 214 aaKnown RBP15.62■□□□□ 0.09
COL11A1-203ENST00000370096 FAM50AQ14320 339 aaKnown RBP15.57■□□□□ 0.08
COL11A1-203ENST00000370096 CANXP27824 592 aaKnown RBP15.57■□□□□ 0.08
COL11A1-203ENST00000370096 TRIM52Q96A61 297 aa15.56■□□□□ 0.08
COL11A1-203ENST00000370096 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
COL11A1-203ENST00000370096 ANP32CO43423 234 aa15.51■□□□□ 0.07
COL11A1-203ENST00000370096 ANP32AP39687 249 aaKnown RBP15.49■□□□□ 0.07
COL11A1-203ENST00000370096 ARXQ96QS3 562 aa15.42■□□□□ 0.06
COL11A1-203ENST00000370096 ANP32BQ92688 251 aaKnown RBP15.41■□□□□ 0.06
COL11A1-203ENST00000370096 GLIPR1L2Q4G1C9 344 aa15.37■□□□□ 0.05
COL11A1-203ENST00000370096 NBR1Q14596 966 aa15.36■□□□□ 0.05
COL11A1-203ENST00000370096 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
COL11A1-203ENST00000370096 ACIN1Q9UKV3 1341 aaKnown RBP15.29■□□□□ 0.04
COL11A1-203ENST00000370096 FKBP8Q14318 412 aa15.27■□□□□ 0.04
COL11A1-203ENST00000370096 NEFMP07197 916 aa15.26■□□□□ 0.03
COL11A1-203ENST00000370096 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
COL11A1-203ENST00000370096 UPF2Q9HAU5 1272 aaKnown RBP15.14■□□□□ 0.01
COL11A1-203ENST00000370096 ARID3CA6NKF2 412 aa15.08■□□□□ 0
COL11A1-203ENST00000370096 FAM9BQ8IZU0 186 aa15.08■□□□□ 0
COL11A1-203ENST00000370096 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ -0
COL11A1-203ENST00000370096 IRX6P78412 446 aaPredicted RBP15.02□□□□□ -0.01
COL11A1-203ENST00000370096 CCDC136Q96JN2 1154 aa14.99□□□□□ -0.01
COL11A1-203ENST00000370096 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
COL11A1-203ENST00000370096 CDK11BP21127 795 aaKnown RBP14.98□□□□□ -0.01
COL11A1-203ENST00000370096 FBLN2P98095 1184 aa14.98□□□□□ -0.01
COL11A1-203ENST00000370096 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
COL11A1-203ENST00000370096 TPRNQ4KMQ1 711 aa14.96□□□□□ -0.01
COL11A1-203ENST00000370096 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
COL11A1-203ENST00000370096 DDX10Q13206 875 aaKnown RBP14.93□□□□□ -0.02
COL11A1-203ENST00000370096 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
COL11A1-203ENST00000370096 TRIM44Q96DX7 344 aaPredicted RBP14.92□□□□□ -0.02
COL11A1-203ENST00000370096 CHGAP10645 457 aaKnown RBP14.91□□□□□ -0.02
COL11A1-203ENST00000370096 AMER1Q5JTC6 1135 aaPredicted RBP14.88□□□□□ -0.03
COL11A1-203ENST00000370096 TULP1O00294 542 aaPredicted RBP14.88□□□□□ -0.03
COL11A1-203ENST00000370096 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.88□□□□□ -0.03
COL11A1-203ENST00000370096 NCLP19338 710 aaKnown RBP14.87□□□□□ -0.03
COL11A1-203ENST00000370096 TNNT2P45379 298 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-203ENST00000370096 DNTTIP2Q5QJE6 756 aaKnown RBP14.84□□□□□ -0.03
COL11A1-203ENST00000370096 TMC1Q8TDI8 760 aa14.83□□□□□ -0.04
COL11A1-203ENST00000370096 NAP1L5Q96NT1 182 aaPredicted RBP14.82□□□□□ -0.04
COL11A1-203ENST00000370096 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
COL11A1-203ENST00000370096 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
COL11A1-203ENST00000370096 A0A0G2JS52 829 aa14.81□□□□□ -0.04
COL11A1-203ENST00000370096 PTMAP06454 111 aaKnown RBP14.81□□□□□ -0.04
COL11A1-203ENST00000370096 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
COL11A1-203ENST00000370096 WDR43Q15061 677 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL11A1-203ENST00000370096 TONSLQ96HA7 1378 aa14.79□□□□□ -0.04
COL11A1-203ENST00000370096 SENP3-EIF4A1A0A087X0R7 540 aa14.79□□□□□ -0.04
COL11A1-203ENST00000370096 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
COL11A1-203ENST00000370096 MYH16Q9H6N6 1097 aa14.76□□□□□ -0.05
COL11A1-203ENST00000370096 TAOK2Q9UL54 1235 aa14.75□□□□□ -0.05
COL11A1-203ENST00000370096 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
COL11A1-203ENST00000370096 BECN1Q14457 450 aa14.74□□□□□ -0.05
COL11A1-203ENST00000370096 ZBTB7CA1YPR0 619 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms