Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MTHFRP42898 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 ATG4C-203ENST00000371120 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 AL354979.1-201ENST00000369027 266 ntTSL 3 BASIC12.24□□□□□ -0.45
MTHFRP42898 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 IGLV1-50-201ENST00000390291 405 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
MTHFRP42898 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 AC130710.1-201ENST00000412381 642 ntTSL 3 BASIC12.24□□□□□ -0.45
MTHFRP42898 RPL23P11-201ENST00000418077 411 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 AC004906.1-201ENST00000423194 969 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 HNRNPA1P35-201ENST00000429216 963 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 RTN2-203ENST00000430715 1127 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 AC016894.1-201ENST00000444364 311 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 AKR1B1P2-201ENST00000494640 934 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 LINC02105-202ENST00000511953 870 ntTSL 3 BASIC12.24□□□□□ -0.45
MTHFRP42898 AC092611.1-201ENST00000514269 2565 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 AC018861.1-201ENST00000518404 1614 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 CCDC90B-211ENST00000529073 719 ntTSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 AP000763.1-201ENST00000539481 325 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC12.24□□□□□ -0.45
MTHFRP42898 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 AC026495.1-201ENST00000556397 530 ntTSL 4 BASIC12.24□□□□□ -0.45
MTHFRP42898 RRN3-206ENST00000564131 1001 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 AC009107.2-201ENST00000569580 577 ntTSL 4 BASIC12.24□□□□□ -0.45
MTHFRP42898 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 AP001793.1-201ENST00000584733 839 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 LINC01872-201ENST00000594261 915 ntTSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 AL034548.1-201ENST00000608495 1672 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 Metazoa_SRP.102-201ENST00000613350 315 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 AC022558.3-201ENST00000616598 688 ntBASIC12.24□□□□□ -0.45
MTHFRP42898 CIDEC-208ENST00000618572 1226 ntTSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 CISTR-202ENST00000626733 464 ntTSL 3 BASIC12.24□□□□□ -0.45
MTHFRP42898 FHL1-229ENST00000629039 1501 ntTSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 IL7-211ENST00000639719 597 ntTSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
MTHFRP42898 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MTHFRP42898 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
MTHFRP42898 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 ZNF239-202ENST00000374446 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 MKLN1-AS-202ENST00000429067 2043 ntTSL 2 BASIC12.23□□□□□ -0.45
MTHFRP42898 ELOC-210ENST00000622804 1976 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MTHFRP42898 KLK7-202ENST00000391807 1912 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MTHFRP42898 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 DFNB59-202ENST00000409117 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MTHFRP42898 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.23□□□□□ -0.45
MTHFRP42898 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.23□□□□□ -0.45
MTHFRP42898 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
MTHFRP42898 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC12.23□□□□□ -0.45
MTHFRP42898 SCP2D1-201ENST00000377428 667 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
MTHFRP42898 GNLY-202ENST00000409696 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 AL157395.1-201ENST00000427630 438 ntTSL 3 BASIC12.23□□□□□ -0.45
MTHFRP42898 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 AC005324.1-201ENST00000434017 746 ntTSL 3 BASIC12.23□□□□□ -0.45
MTHFRP42898 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 SLC2A10-202ENST00000486000 497 ntTSL 3 BASIC12.23□□□□□ -0.45
MTHFRP42898 MT1DP-202ENST00000486551 150 ntBASIC12.23□□□□□ -0.45
MTHFRP42898 AC008429.1-201ENST00000520067 966 ntTSL 2 BASIC12.23□□□□□ -0.45
MTHFRP42898 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC12.23□□□□□ -0.45
MTHFRP42898 AC092769.1-201ENST00000561101 355 ntTSL 3 BASIC12.23□□□□□ -0.45
MTHFRP42898 TMEM95-203ENST00000576060 622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 RPL36-204ENST00000579446 452 ntTSL 2 BASIC12.23□□□□□ -0.45
MTHFRP42898 PAEP-209ENST00000611414 729 ntTSL 5 BASIC12.23□□□□□ -0.45
MTHFRP42898 AC074050.4-201ENST00000614576 533 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms