Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 AC027682.1-201ENST00000562846 899 ntBASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGB3Q9Y5G1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 ZNRF2P3-201ENST00000424200 374 ntBASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB3Q9Y5G1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB3Q9Y5G1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGB3Q9Y5G1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.2■□□□□ 0.83
PCDHGB3Q9Y5G1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB3Q9Y5G1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 AC105265.2-201ENST00000467189 838 ntBASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 AC079089.2-201ENST00000531211 1277 ntBASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGB3Q9Y5G1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 AC244015.2-201ENST00000616358 1861 ntBASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB3Q9Y5G1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGB3Q9Y5G1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms