Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM5Q9Y4Y9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.58■□□□□ 0.41
LSM5Q9Y4Y9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
LSM5Q9Y4Y9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 MIR4281-201ENST00000580852 62 ntBASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM5Q9Y4Y9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 FP325331.1-202ENST00000623531 1380 ntBASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 CA15P2-201ENST00000611168 834 ntBASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LSM5Q9Y4Y9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
LSM5Q9Y4Y9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM5Q9Y4Y9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 AC004687.1-201ENST00000579003 1625 ntBASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 AC007952.6-201ENST00000573168 2673 ntBASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 AC003957.1-201ENST00000625108 2673 ntBASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 AC139795.1-202ENST00000500444 432 ntBASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 THA1P-201ENST00000590384 1145 ntBASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.54■□□□□ 0.4
LSM5Q9Y4Y9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 RNF126P1-201ENST00000567452 1320 ntBASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM5Q9Y4Y9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms