Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1Q9Y2A7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.46■■□□□ 1.03
NCKAP1Q9Y2A7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1Q9Y2A7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCKAP1Q9Y2A7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.46■■□□□ 1.03
NCKAP1Q9Y2A7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.46■■□□□ 1.03
NCKAP1Q9Y2A7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 GPX1P1-201ENST00000388829 606 ntBASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 AC010141.2-201ENST00000452426 721 ntBASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NCKAP1Q9Y2A7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 DUX4L16-201ENST00000555130 1264 ntBASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NCKAP1Q9Y2A7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 AP006587.3-201ENST00000525742 1516 ntBASIC21.43■■□□□ 1.02
NCKAP1Q9Y2A7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 AL355802.2-201ENST00000402069 882 ntBASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NCKAP1Q9Y2A7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 AL121832.2-201ENST00000610979 668 ntBASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NCKAP1Q9Y2A7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 AC053503.5-201ENST00000601508 636 ntBASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 AC005181.1-201ENST00000604782 1256 ntBASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NCKAP1Q9Y2A7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NCKAP1Q9Y2A7 AC137767.1-201ENST00000602918 1920 ntBASIC21.39■■□□□ 1.02
NCKAP1Q9Y2A7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NCKAP1Q9Y2A7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.39■■□□□ 1.02
NCKAP1Q9Y2A7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
NCKAP1Q9Y2A7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCKAP1Q9Y2A7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NCKAP1Q9Y2A7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms